RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 RIOX1Q9H6W3 641 aa13.49□□□□□ -0.25
MRPL55-213ENST00000366740 MLXIPQ9HAP2 919 aa13.49□□□□□ -0.25
MRPL55-213ENST00000366740 RC3H2Q9HBD1 1191 aaKnown RBP13.49□□□□□ -0.25
MRPL55-213ENST00000366740 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
MRPL55-213ENST00000366740 FAM50BQ9Y247 325 aa13.49□□□□□ -0.25
MRPL55-213ENST00000366740 STAM2O75886 525 aa13.48□□□□□ -0.25
MRPL55-213ENST00000366740 LTBRP36941 435 aa13.48□□□□□ -0.25
MRPL55-213ENST00000366740 MRPS9P82933 396 aaKnown RBP13.48□□□□□ -0.25
MRPL55-213ENST00000366740 NECTIN1Q15223 517 aa13.48□□□□□ -0.25
MRPL55-213ENST00000366740 ALYREFQ86V81 257 aaKnown RBP13.48□□□□□ -0.25
MRPL55-213ENST00000366740 ZFP91Q96JP5 570 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-213ENST00000366740 INPP4AQ96PE3 977 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-213ENST00000366740 SPATA31C2B4DYI2 1134 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 GCOM1H8Y6P7 765 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-213ENST00000366740 UPP2O95045 317 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 CTSHP09668 335 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 POLR2MP0CAP2 368 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 GNAT1P11488 350 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 ANTXR2P58335 489 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 TRAF1Q13077 416 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 SEMA3FQ13275 785 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 NEDD9Q14511 834 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 GRM4Q14833 912 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 CSPP1Q1MSJ5 1256 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 CTC1Q2NKJ3 1217 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 GNPTABQ3T906 1256 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 METTL7BQ6UX53 244 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 RPAINQ86UA6 219 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 ADHFE1Q8IWW8 467 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 MB21D2Q8IYB1 491 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-213ENST00000366740 PIGSQ96S52 555 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 GPR20Q99678 358 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 IFIH1Q9BYX4 1025 aaKnown RBP13.47□□□□□ -0.25
MRPL55-213ENST00000366740 LMAN2LQ9H0V9 348 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 PPP4R2Q9NY27 417 aa13.47□□□□□ -0.25
MRPL55-213ENST00000366740 ADGRA3Q8IWK6 1321 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 NOP56O00567 594 aaKnown RBP13.46□□□□□ -0.25
MRPL55-213ENST00000366740 SLC27A2O14975 620 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 NCK2O43639 380 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 CYTH3O43739 400 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 CDC45O75419 566 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 RB1P06400 928 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 CENPBP07199 599 aaPredicted RBP13.46□□□□□ -0.25
MRPL55-213ENST00000366740 NHLH1Q02575 133 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 SMAD2Q15796 467 aaKnown RBP13.46□□□□□ -0.25
MRPL55-213ENST00000366740 CREB3L3Q68CJ9 461 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 HOMER1Q86YM7 354 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 FIBCD1Q8N539 461 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 NCOA7Q8NI08 942 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 LMBR1Q8WVP7 490 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 EHMT1Q9H9B1 1298 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 ANO2Q9NQ90 1003 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 SETD4Q9NVD3 440 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 CLDND1Q9NY35 253 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 RWDD3Q9Y3V2 267 aa13.46□□□□□ -0.25
MRPL55-213ENST00000366740 MYO10Q9HD67 2058 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 PLXNA3P51805 1871 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 FIBPO43427 364 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 CTNNB1P35222 781 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 IRS1P35568 1242 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 BMPR1AP36894 532 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 MRE11P49959 708 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 MGAT3Q09327 533 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 TRDNQ13061 729 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 ERICH6BQ5W0A0 696 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 CYFIP1Q7L576 1253 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 TRIM50Q86XT4 487 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 IGDCC4Q8TDY8 1250 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 CLP1Q92989 425 aaKnown RBP13.45□□□□□ -0.26
MRPL55-213ENST00000366740 IL17RAQ96F46 866 aa13.45□□□□□ -0.26
MRPL55-213ENST00000366740 C11orf84Q9BUA3 381 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-213ENST00000366740 ZNF215Q9UL58 517 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-213ENST00000366740 NRCAMQ92823 1304 aa13.44□□□□□ -0.26
MRPL55-213ENST00000366740 PNMA6FA0A0J9YX94 578 aa13.44□□□□□ -0.26
MRPL55-213ENST00000366740 IFIT3O14879 490 aaKnown RBP13.44□□□□□ -0.26
MRPL55-213ENST00000366740 GRM6O15303 877 aa13.44□□□□□ -0.26
MRPL55-213ENST00000366740 MBTPS2O43462 519 aa13.44□□□□□ -0.26
MRPL55-213ENST00000366740 CHRNA1P02708 482 aa13.44□□□□□ -0.26
MRPL55-213ENST00000366740 ARHGAP4P98171 946 aa13.44□□□□□ -0.26
MRPL55-213ENST00000366740 DLX2Q07687 328 aaPredicted RBP13.44□□□□□ -0.26
MRPL55-213ENST00000366740 HYAL1Q12794 435 aa13.44□□□□□ -0.26
MRPL55-213ENST00000366740 RALYLQ86SE5 291 aaKnown RBP13.44□□□□□ -0.26
MRPL55-213ENST00000366740 ZNF689Q96CS4 500 aaPredicted RBP13.44□□□□□ -0.26
MRPL55-213ENST00000366740 FBXL18Q96ME1 805 aa13.44□□□□□ -0.26
MRPL55-213ENST00000366740 UIMC1Q96RL1 719 aa13.44□□□□□ -0.26
MRPL55-213ENST00000366740 SENP7Q9BQF6 1050 aa13.44□□□□□ -0.26
MRPL55-213ENST00000366740 TELO2Q9Y4R8 837 aa13.44□□□□□ -0.26
MRPL55-213ENST00000366740 TBX10O75333 385 aa13.43□□□□□ -0.26
MRPL55-213ENST00000366740 MMP1P03956 469 aa13.43□□□□□ -0.26
MRPL55-213ENST00000366740 TROAPQ12815 778 aa13.43□□□□□ -0.26
MRPL55-213ENST00000366740 HERC4Q5GLZ8 1057 aaPredicted RBP13.43□□□□□ -0.26
MRPL55-213ENST00000366740 PCNX4Q63HM2 1172 aa13.43□□□□□ -0.26
MRPL55-213ENST00000366740 TAF2Q6P1X5 1199 aa13.43□□□□□ -0.26
MRPL55-213ENST00000366740 EP400NLQ6ZTU2 488 aa13.43□□□□□ -0.26
MRPL55-213ENST00000366740 RASEFQ8IZ41 740 aa13.43□□□□□ -0.26
MRPL55-213ENST00000366740 POP1Q99575 1024 aaKnown RBP13.43□□□□□ -0.26
MRPL55-213ENST00000366740 UPF3BQ9BZI7 483 aaKnown RBP13.43□□□□□ -0.26
MRPL55-213ENST00000366740 GHRP10912 638 aa13.42□□□□□ -0.26
MRPL55-213ENST00000366740 SMAD4Q13485 552 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms