RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 TRPM2O94759 1503 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 RNF103-CHMP3A0A140T963 221 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 MIF4GDA9UHW6 222 aaKnown RBP18.01■□□□□ 0.47
NID1-202ENST00000366595 TMCC1O94876 653 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 ZBED1O96006 694 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 SOX5P35711 763 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 ARL4CP56559 192 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 KLHL38Q2WGJ6 581 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 SLFNL1Q499Z3 407 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 VSTM4Q8IW00 320 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 IFNL3Q8IZI9 196 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 ICA1LQ8NDH6 482 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 C19orf44Q9H6X5 657 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 COG4Q9H9E3 785 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 ABCB6Q9NP58 842 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 OLA1Q9NTK5 396 aaKnown RBP18.01■□□□□ 0.47
NID1-202ENST00000366595 DDX28Q9NUL7 540 aaKnown RBP18.01■□□□□ 0.47
NID1-202ENST00000366595 GJA3Q9Y6H8 435 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 BTBD18B2RXH4 712 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 EIF3DO15371 548 aaKnown RBP eCLIP18.01■□□□□ 0.47
NID1-202ENST00000366595 ZMYND10O75800 440 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 DAB2P98082 770 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 ALCAMQ13740 583 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 LZICQ8WZA0 190 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 SNX25Q9H3E2 840 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 SYNJ2BP-COX16A0A087WUM0 186 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 GOLGA8MH3BSY2 632 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 NDUFA10O95299 355 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 PMLP29590 882 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 MRPL28Q13084 256 aaKnown RBP18.01■□□□□ 0.47
NID1-202ENST00000366595 MED21Q13503 144 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 NDUFAF2Q8N183 169 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 COX16Q9P0S2 106 aa18.01■□□□□ 0.47
NID1-202ENST00000366595 TNRQ92752 1358 aa18■□□□□ 0.47
NID1-202ENST00000366595 WDR64B1ANS9 1081 aa18■□□□□ 0.47
NID1-202ENST00000366595 AARSP49588 968 aaKnown RBP eCLIP18■□□□□ 0.47
NID1-202ENST00000366595 ENAHQ8N8S7 591 aaPredicted RBP18■□□□□ 0.47
NID1-202ENST00000366595 NHEJ1Q9H9Q4 299 aaPredicted RBP18■□□□□ 0.47
NID1-202ENST00000366595 HNRNPCP07910 306 aaKnown RBP eCLIP18■□□□□ 0.473e-6■□□□□ 11
NID1-202ENST00000366595 DLGAP5Q15398 846 aa18■□□□□ 0.47
NID1-202ENST00000366595 TTC13Q8NBP0 860 aa18■□□□□ 0.47
NID1-202ENST00000366595 WDR11Q9BZH6 1224 aa18■□□□□ 0.47
NID1-202ENST00000366595 KLC2Q9H0B6 622 aa18■□□□□ 0.47
NID1-202ENST00000366595 PCDHA13Q9Y5I0 950 aa18■□□□□ 0.47
NID1-202ENST00000366595 H0Y626 953 aa18■□□□□ 0.47
NID1-202ENST00000366595 TRIM16O95361 564 aa18■□□□□ 0.47
NID1-202ENST00000366595 HLA-DPA1P20036 260 aa18■□□□□ 0.47
NID1-202ENST00000366595 FBLN1P23142 703 aa18■□□□□ 0.47
NID1-202ENST00000366595 CAPRIN2Q6IMN6 1127 aaKnown RBP18■□□□□ 0.47
NID1-202ENST00000366595 CFAP36Q96G28 342 aa18■□□□□ 0.47
NID1-202ENST00000366595 A0A0G2JND7 137 aa18■□□□□ 0.47
NID1-202ENST00000366595 CHL1O00533 1208 aa18■□□□□ 0.47
NID1-202ENST00000366595 MOCS3O95396 460 aa18■□□□□ 0.47
NID1-202ENST00000366595 SERPINB4P48594 390 aa18■□□□□ 0.47
NID1-202ENST00000366595 GRIN1Q05586 938 aa18■□□□□ 0.47
NID1-202ENST00000366595 LRRC59Q96AG4 307 aaKnown RBP18■□□□□ 0.47
NID1-202ENST00000366595 GRAMD1AQ96CP6 724 aa18■□□□□ 0.47
NID1-202ENST00000366595 RNF26Q9BY78 433 aaPredicted RBP18■□□□□ 0.47
NID1-202ENST00000366595 GINM1Q9NU53 330 aa18■□□□□ 0.47
NID1-202ENST00000366595 PAIP2BQ9ULR5 123 aaKnown RBP18■□□□□ 0.47
NID1-202ENST00000366595 ZBTB12Q9Y330 459 aaPredicted RBP18■□□□□ 0.47
NID1-202ENST00000366595 INSRP06213 1382 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 USP17L12C9JPN9 530 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 USP17L21D6R901 530 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 CARSP49589 748 aaKnown RBP17.99■□□□□ 0.47
NID1-202ENST00000366595 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 BTBD6Q96KE9 485 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 G3BP2Q9UN86 482 aaKnown RBP17.99■□□□□ 0.47
NID1-202ENST00000366595 NR1H4Q96RI1 486 aaPredicted RBP17.99■□□□□ 0.47
NID1-202ENST00000366595 KIAA1024Q9UPX6 916 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 PLAAQ9Y263 795 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 FTCDO95954 541 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 RARS2Q5T160 578 aaKnown RBP17.99■□□□□ 0.47
NID1-202ENST00000366595 CLIC6Q96NY7 704 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 CALN1Q9BXU9 219 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 ADCY9O60503 1353 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 WDR91A4D1P6 747 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 ARL13BQ3SXY8 428 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.99■□□□□ 0.47
NID1-202ENST00000366595 SLC4A7Q9Y6M7 1214 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 SYNGAP1Q96PV0 1343 aa17.99■□□□□ 0.47
NID1-202ENST00000366595 HOXC9P31274 260 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 EIF4A3P38919 411 aaKnown RBP17.98■□□□□ 0.47
NID1-202ENST00000366595 RANBP1P43487 201 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 MAPRE2Q15555 327 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 SUGCTQ9HAC7 445 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 POLE3Q9NRF9 147 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 CLIC4Q9Y696 253 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 TJP3O95049 919 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 CCNE1P24864 410 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 AP1B1Q10567 949 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 SMCR8Q8TEV9 937 aaPredicted RBP17.98■□□□□ 0.47
NID1-202ENST00000366595 ZNF594Q96JF6 807 aaPredicted RBP17.98■□□□□ 0.47
NID1-202ENST00000366595 SLC8A2Q9UPR5 921 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 MKRN3Q13064 507 aaKnown RBP17.98■□□□□ 0.47
NID1-202ENST00000366595 LARGE2Q8N3Y3 721 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 HINFPQ9BQA5 517 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 SYNJ1O43426 1573 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 ALAS1P13196 640 aa17.98■□□□□ 0.47
NID1-202ENST00000366595 DRP2Q13474 957 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms