RNA–Protein interactions for RNA: ENST00000364019.1

RNU4-13P-201, Transcript of RNA, U4 small nuclear 13, pseudogene, humanhuman

BASIC

Gene RNU4-13P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-13P-201ENST00000364019 SPIRE1Q08AE8 756 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 EFEMP1Q12805 493 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 PAK1Q13153 545 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 VMACQ2NL98 169 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 C2orf27AQ580R0 203 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 FAM209AQ5JX71 171 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 CD300LDQ6UXZ3 194 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 TTLL7Q6ZT98 887 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 C16orf59Q7L2K0 433 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 FEZF2Q8TBJ5 459 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 THAP3Q8WTV1 239 aaPredicted RBP2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 RELTQ969Z4 430 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 YTHDC1Q96MU7 727 aaKnown RBP2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 RBM15Q96T37 977 aaKnown RBP eCLIP2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 SYT3Q9BQG1 590 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 SPATA25Q9BR10 227 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 JAM3Q9BX67 310 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 MRPL4Q9BYD3 311 aaKnown RBP2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 IPPKQ9H8X2 491 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 ADAMTS12P58397 1594 aa2.78□□□□□ -1.96
RNU4-13P-201ENST00000364019 CLASP1Q7Z460 1538 aa2.78□□□□□ -1.97
RNU4-13P-201ENST00000364019 ABCA10Q8WWZ4 1543 aa2.78□□□□□ -1.97
RNU4-13P-201ENST00000364019 AQRO60306 1485 aaKnown RBP eCLIP2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 IFT140Q96RY7 1462 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 KDM2BQ8NHM5 1336 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 BLACEA4D250 179 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 ZNF561-AS1K7EIQ3 104 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 ACOT7O00154 380 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 NKRFO15226 690 aaKnown RBP eCLIP2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 SMARCA5O60264 1052 aaPredicted RBP2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 FOXD2O60548 495 aaPredicted RBP2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 MAFO75444 373 aaPredicted RBP2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 CYP7B1O75881 506 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 AMY2AP04746 511 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 CKMP06732 381 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 AMY2BP19961 511 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 KRTAP10-2P60368 255 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 TUSC3Q13454 348 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 GPR19Q15760 415 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 SKOR2Q2VWA4 1001 aaPredicted RBP2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 PAN2Q504Q3 1202 aaKnown RBP2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 FIGNQ5HY92 759 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 LCE5AQ5TCM9 118 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 HHIPL2Q6UWX4 724 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 KCTD1Q719H9 257 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 ADGRG2Q8IZP9 1017 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 ZSWIM2Q8NEG5 633 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 ZCCHC14Q8WYQ9 949 aaKnown RBP2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 ALG1Q9BT22 464 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 SSBP3Q9BWW4 388 aaPredicted RBP2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 OSBPL2Q9H1P3 480 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 DLL4Q9NR61 685 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 SRPK3Q9UPE1 567 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 TRAF6Q9Y4K3 522 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 CEP170Q5SW79 1584 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 ERCC6L2Q5T890 1561 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 RUSC2Q8N2Y8 1516 aa2.77□□□□□ -1.97
RNU4-13P-201ENST00000364019 RIMBP3CA6NJZ7 1639 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 RIMBP3BA6NNM3 1639 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 SHROOM2Q13796 1616 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 RIMBP3Q9UFD9 1639 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 ZNF839A8K0R7 811 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 MAN2B1O00754 1011 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 SLC27A2O14975 620 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 PRICKLE3O43900 615 aaPredicted RBP2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 CLASP2O75122 1294 aaKnown RBP2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 KLHL18O94889 574 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 NPTXRO95502 500 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 KNG1P01042 644 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 ITGB3P05106 788 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 GNAT1P11488 350 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 SYN1P17600 705 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 KCNA6P17658 529 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 GJA4P35212 333 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 MLLT6P55198 1093 aaPredicted RBP2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 GJA9P57773 515 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 HERVK_113P62684 666 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 SMAD4Q13485 552 aaKnown RBP2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 NT5DC1Q5TFE4 455 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 CD276Q5ZPR3 534 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 NLGN4XQ8N0W4 816 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 LILRB2Q8N423 598 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 TXNDC5Q8NBS9 432 aaKnown RBP2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 SLC7A14Q8TBB6 771 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 FBXW5Q969U6 566 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 SCLYQ96I15 445 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 CHAMP1Q96JM3 812 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 CLIC6Q96NY7 704 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 DNAJC7Q99615 494 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 CDC6Q99741 560 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 CELF4Q9BZC1 486 aaKnown RBP2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 SLC52A2Q9HAB3 445 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 SMURF1Q9HCE7 757 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 TRIM39Q9HCM9 518 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 KCND1Q9NSA2 647 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 PFDN2Q9UHV9 154 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 DSEQ9UL01 958 aa2.76□□□□□ -1.97
RNU4-13P-201ENST00000364019 DUSP10Q9Y6W6 482 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms