RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 U2AF1Q01081 240 aaKnown RBP eCLIP5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 PDCD1Q15116 288 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 SEC23AQ15436 765 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 MROH9Q5TGP6 573 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 CPZQ66K79 652 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 ESRP1Q6NXG1 681 aaKnown RBP5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 SLC4A10Q6U841 1118 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 RIOX2Q8IUF8 465 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 ZDHHC13Q8IUH4 622 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 UHMK1Q8TAS1 419 aaKnown RBP5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 ASB11Q8WXH4 323 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 LINC01599Q8WXQ3 324 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 SLC6A20Q9NP91 592 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 PIM2Q9P1W9 311 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 DSEQ9UL01 958 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 ZBTB21Q9ULJ3 1066 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 ZNF652Q9Y2D9 606 aa5.98□□□□□ -1.45
RNU6-1339P-201ENST00000363574 PRR19A6NJB7 356 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 LTFP02788 710 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 FOSL1P15407 271 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 LPOP22079 712 aaPredicted RBP5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 CORO7P57737 925 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 HTRA3P83110 453 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 RBM10P98175 930 aaKnown RBP5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 AOC3Q16853 763 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 MINDY4Q4G0A6 757 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 SYCP2LQ5T4T6 812 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 CC2D1AQ6P1N0 951 aaPredicted RBP5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 KSR2Q6VAB6 950 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 EPM2AIP1Q7L775 607 aaPredicted RBP5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 CD244Q9BZW8 370 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 ACSS2Q9NR19 701 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 CCM2LQ9NUG4 571 aaPredicted RBP5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 MRFAP1Q9Y605 127 aa5.97□□□□□ -1.45
RNU6-1339P-201ENST00000363574 RNF225M0QZC1 329 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 XPOTO43592 962 aaKnown RBP5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 KDM1AO60341 852 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 USP2O75604 605 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 CYP17A1P05093 508 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 CD40P25942 277 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 CYP2C19P33261 490 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 KIR2DL1P43626 348 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 KIR2DL2P43627 348 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 PRKCQQ04759 706 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 HDAC1Q13547 482 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 GTF2H3Q13889 308 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 HSF5Q4G112 596 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 PPP4R4Q6NUP7 873 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 EP400NLQ6ZTU2 488 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 FRMD7Q6ZUT3 714 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 NLGN4XQ8N0W4 816 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 LZTR1Q8N653 840 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 USP33Q8TEY7 942 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 CLIP3Q96DZ5 547 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 HSPBAP1Q96EW2 488 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 ORAI2Q96SN7 254 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 NUP88Q99567 741 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 SP110Q9HB58 689 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 ANLNQ9NQW6 1124 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 KCNH7Q9NS40 1196 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 VAV3Q9UKW4 847 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 ATP23Q9Y6H3 246 aa5.96□□□□□ -1.46
RNU6-1339P-201ENST00000363574 KLHL33A6NCF5 533 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 KRIT1O00522 736 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 ZRANB2O95218 330 aaKnown RBP eCLIP5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 H2AFB1P0C5Y9 115 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 H2AFB2P0C5Z0 115 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 ZGLP1P0C6A0 271 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 DUSP4Q13115 394 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 EMC4Q5J8M3 183 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 EFCAB2Q5VUJ9 269 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 SMC5Q8IY18 1101 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 AMOTL1Q8IY63 956 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 ZZZ3Q8IYH5 903 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 SYTL4Q96C24 671 aaPredicted RBP5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 TIFAQ96CG3 184 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 ASIC4Q96FT7 647 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 TEKT5Q96M29 485 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 AIFM3Q96NN9 605 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 SPOCK3Q9BQ16 436 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 CARS2Q9HA77 564 aaKnown RBP5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 PRDM11Q9NQV5 511 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 IMPACTQ9P2X3 320 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 INVSQ9Y283 1065 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 TELO2Q9Y4R8 837 aa5.95□□□□□ -1.46
RNU6-1339P-201ENST00000363574 FAM90A27PA6NNH2 459 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 SLC27A2O14975 620 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 EIF3JO75822 258 aaKnown RBP5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 IL33O95760 270 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 NTRK1P04629 796 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 ASGR2P07307 311 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 MSL3P1P0C860 447 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 VCAM1P19320 739 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 TACR1P25103 407 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 SDHAP31040 664 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 HOXA10P31260 410 aaPredicted RBP5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 EPHA5P54756 1037 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 RTP1P59025 263 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 MVKQ03426 396 aa5.94□□□□□ -1.46
RNU6-1339P-201ENST00000363574 IKZF1Q13422 519 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms