RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 IRX2Q9BZI1 471 aaPredicted RBP7.47□□□□□ -1.21
CCDC196-201ENST00000359454 EPHX3Q9H6B9 360 aa7.47□□□□□ -1.21
CCDC196-201ENST00000359454 CERS4Q9HA82 394 aa7.47□□□□□ -1.21
CCDC196-201ENST00000359454 DNAAF2Q9NVR5 837 aaKnown RBP7.47□□□□□ -1.21
CCDC196-201ENST00000359454 CCPG1Q9ULG6 757 aa7.47□□□□□ -1.21
CCDC196-201ENST00000359454 PRR12Q9ULL5 1215 aa7.47□□□□□ -1.21
CCDC196-201ENST00000359454 DDX49Q9Y6V7 483 aaKnown RBP7.47□□□□□ -1.21
CCDC196-201ENST00000359454 TCF20Q9UGU0 1960 aaKnown RBP7.46□□□□□ -1.21
CCDC196-201ENST00000359454 EPOPA6NHQ4 379 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 M0R2C6 588 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 NKRFO15226 690 aaKnown RBP eCLIP7.46□□□□□ -1.22
CCDC196-201ENST00000359454 SMARCA5O60264 1052 aaPredicted RBP7.46□□□□□ -1.22
CCDC196-201ENST00000359454 BAIAP3O94812 1187 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 AVPP01185 164 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 ICAM1P05362 532 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 ADH1AP07327 375 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 IQCF3P0C7M6 154 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 ALDH5A1P51649 535 aaPredicted RBP7.46□□□□□ -1.22
CCDC196-201ENST00000359454 SNAP25P60880 206 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 CLDN10P78369 228 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 TAP1Q03518 808 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 PPARAQ07869 468 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 BFSP2Q13515 415 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 FAM47CQ5HY64 1035 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 NFRKBQ6P4R8 1299 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 KCTD1Q719H9 257 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 MPHOSPH6Q99547 160 aaKnown RBP7.46□□□□□ -1.22
CCDC196-201ENST00000359454 FTOQ9C0B1 505 aaKnown RBP eCLIP7.46□□□□□ -1.22
CCDC196-201ENST00000359454 NAPBQ9H115 298 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 STX8Q9UNK0 236 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 PCDHGA11Q9Y5H2 935 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 RAD50Q92878 1312 aa7.46□□□□□ -1.22
CCDC196-201ENST00000359454 MYO9BQ13459 2157 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 LAMA2P24043 3122 aaKnown RBP7.45□□□□□ -1.22
CCDC196-201ENST00000359454 TSPY2A6NKD2 308 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 RRP9O43818 475 aaKnown RBP7.45□□□□□ -1.22
CCDC196-201ENST00000359454 ATG7O95352 703 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 KCNJ6P48051 423 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 GRB10Q13322 594 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 BAATQ14032 418 aaPredicted RBP7.45□□□□□ -1.22
CCDC196-201ENST00000359454 CRTC2Q53ET0 693 aaPredicted RBP7.45□□□□□ -1.22
CCDC196-201ENST00000359454 KRT40Q6A162 431 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 Q6ZVU0 165 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 CCDC155Q8N6L0 562 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 DCAF4Q8WV16 495 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 CHMP4CQ96CF2 233 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 PURBQ96QR8 312 aaKnown RBP7.45□□□□□ -1.22
CCDC196-201ENST00000359454 RANBP17Q9H2T7 1088 aaKnown RBP7.45□□□□□ -1.22
CCDC196-201ENST00000359454 LMCD1Q9NZU5 365 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 PNMA2Q9UL42 364 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 VCANP13611 3396 aa7.45□□□□□ -1.22
CCDC196-201ENST00000359454 EYSQ5T1H1 3165 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 PTPDC1A2A3K4 754 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 B4DLN1 442 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 PI4K2BG5E9Z4 385 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 ARHGEF15O94989 841 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 NOVP48745 357 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 MRPL12P52815 198 aaKnown RBP7.44□□□□□ -1.22
CCDC196-201ENST00000359454 PTK7Q13308 1070 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 PPP2R5BQ15173 497 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 CCDC96Q2M329 555 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 CTC1Q2NKJ3 1217 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 SYDE2Q5VT97 1194 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 BTNL9Q6UXG8 535 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 MEIOBQ8N635 442 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 CAGE1Q8TC20 777 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 AFAP1L1Q8TED9 768 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 SCFD2Q8WU76 684 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 IL17RBQ9NRM6 502 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 KIAA1024Q9UPX6 916 aa7.44□□□□□ -1.22
CCDC196-201ENST00000359454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCDC196-201ENST00000359454 CDH23Q9H251 3354 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 PRUNE2Q8WUY3 3088 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 NFIBO00712 420 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 LPXNO60711 386 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 PARNO95453 639 aaKnown RBP7.43□□□□□ -1.22
CCDC196-201ENST00000359454 EDNRBP24530 442 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 CALML3P27482 149 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 SLC16A2P36021 539 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 WDR5P61964 334 aaKnown RBP7.43□□□□□ -1.22
CCDC196-201ENST00000359454 RELBQ01201 579 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 PTGISQ16647 500 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 ZMYM1Q5SVZ6 1142 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 TSHZ3Q63HK5 1081 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 TTBK2Q6IQ55 1244 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 RNF207Q6ZRF8 634 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 SESTD1Q86VW0 696 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 DNERQ8NFT8 737 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 TPCN2Q8NHX9 752 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 CLEC4DQ8WXI8 215 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 SEC62Q99442 399 aaKnown RBP7.43□□□□□ -1.22
CCDC196-201ENST00000359454 DCTPP1Q9H773 170 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 C11orf16Q9NQ32 467 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 NOVA2Q9UNW9 492 aaKnown RBP7.43□□□□□ -1.22
CCDC196-201ENST00000359454 MTMR7Q9Y216 660 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 SCN5AQ14524 2016 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 NCOR1O75376 2440 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 TTC41PQ6P2S7 1318 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 TANC1Q9C0D5 1861 aa7.43□□□□□ -1.22
CCDC196-201ENST00000359454 LCTP09848 1927 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms