RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 APTXQ7Z2E3 356 aaKnown RBP7.47□□□□□ -1.21
RTN4-203ENST00000357376 SFR1Q86XK3 245 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 CCDC105Q8IYK2 499 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 KIAA0895Q8NCT3 520 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 ZIM3Q96PE6 472 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 PLCD4Q9BRC7 762 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 NARFQ9UHQ1 456 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 NOVA2Q9UNW9 492 aaKnown RBP7.47□□□□□ -1.21
RTN4-203ENST00000357376 PNMA6FA0A0J9YX94 578 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 NF2P35240 595 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 IFNAR2P48551 515 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 SP4Q02446 784 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 CALCOCO2Q13137 446 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 SEL1L2Q5TEA6 688 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 PNMA8AQ86V59 439 aaPredicted RBP7.47□□□□□ -1.21
RTN4-203ENST00000357376 CCDC50Q8IVM0 306 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 ADGRF4Q8IZF3 695 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 OR2W6PQ8NHA6 318 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 PIGOQ8TEQ8 1089 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 ARL8AQ96BM9 186 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 SAMD15Q9P1V8 674 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 BCS1LQ9Y276 419 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 RABGAP1Q9Y3P9 1069 aa7.47□□□□□ -1.21
RTN4-203ENST00000357376 ARHGEF35A5YM69 484 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 EPHB6O15197 1021 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 BUB1BO60566 1050 aaPredicted RBP7.46□□□□□ -1.21
RTN4-203ENST00000357376 VPS41P49754 854 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 PLTPP55058 493 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 ICA1Q05084 483 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 GRB10Q13322 594 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 TMEM132AQ24JP5 1023 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 CERKLQ49MI3 558 aaPredicted RBP7.46□□□□□ -1.21
RTN4-203ENST00000357376 GRIPAP1Q4V328 841 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 GPATCH4Q5T3I0 446 aaKnown RBP7.46□□□□□ -1.21
RTN4-203ENST00000357376 FBXW10Q5XX13 1052 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 DDX42Q86XP3 938 aaKnown RBP eCLIP7.46□□□□□ -1.217e-7■■□□□ 12.5
RTN4-203ENST00000357376 FAM178BQ8IXR5 827 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 TEKT1Q969V4 418 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 SHISA4Q96DD7 197 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 BICD1Q96G01 975 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 ANO3Q9BYT9 981 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 RNF14Q9UBS8 474 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 PTPN22Q9Y2R2 807 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 THRAP3Q9Y2W1 955 aaKnown RBP7.46□□□□□ -1.21
RTN4-203ENST00000357376 BCL9O00512 1426 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 FLT1P17948 1338 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 GBP2P32456 591 aaPredicted RBP7.46□□□□□ -1.21
RTN4-203ENST00000357376 SLCO1A2P46721 670 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 AMPD2Q01433 879 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 MTMR3Q13615 1198 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 DENND2CQ68D51 928 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 FBXO11Q86XK2 927 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 FAM186BQ8IYM0 893 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 SLFN12Q8IYM2 578 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 CACNA2D3Q8IZS8 1091 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 GLIS3Q8NEA6 775 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 ARHGEF1Q92888 912 aaKnown RBP7.46□□□□□ -1.21
RTN4-203ENST00000357376 TNFRSF25Q93038 417 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 MTMR8Q96EF0 704 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 NAP1L3Q99457 506 aaPredicted RBP7.46□□□□□ -1.21
RTN4-203ENST00000357376 EHMT1Q9H9B1 1298 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 VEZTQ9HBM0 779 aa7.46□□□□□ -1.21
RTN4-203ENST00000357376 GAS7O60861 476 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 FGGP02679 453 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 EEF2P13639 858 aaKnown RBP7.46□□□□□ -1.22
RTN4-203ENST00000357376 SEC24CP53992 1094 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 RNF10Q8N5U6 811 aaKnown RBP7.46□□□□□ -1.22
RTN4-203ENST00000357376 WHAMMQ8TF30 809 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 MRRFQ96E11 262 aaKnown RBP7.46□□□□□ -1.22
RTN4-203ENST00000357376 PACSIN1Q9BY11 444 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 GLT8D2Q9H1C3 349 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 AMACRQ9UHK6 382 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.46□□□□□ -1.22
RTN4-203ENST00000357376 PALM3A6NDB9 673 aaPredicted RBP7.46□□□□□ -1.22
RTN4-203ENST00000357376 EIF3HO15372 352 aaKnown RBP eCLIP7.46□□□□□ -1.22
RTN4-203ENST00000357376 RGS16O15492 202 aaPredicted RBP7.46□□□□□ -1.22
RTN4-203ENST00000357376 KLRC4O43908 158 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 RPS6KA4O75676 772 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 PDHBP11177 359 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 KRT5P13647 590 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 GCFC2P16383 781 aaKnown RBP7.46□□□□□ -1.22
RTN4-203ENST00000357376 SLC9A1P19634 815 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 GPSM2P81274 684 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 ZNF211Q13398 564 aaPredicted RBP7.46□□□□□ -1.22
RTN4-203ENST00000357376 CTTNQ14247 550 aaKnown RBP7.46□□□□□ -1.22
RTN4-203ENST00000357376 CDC37Q16543 378 aaPredicted RBP7.46□□□□□ -1.22
RTN4-203ENST00000357376 ODR4Q5SWX8 454 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 ICE2Q659A1 982 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 HOOK3Q86VS8 718 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 PROM2Q8N271 834 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 UBL4BQ8N7F7 174 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 ZNF507Q8TCN5 953 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 NUDT12Q9BQG2 462 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 RAB17Q9H0T7 212 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 ASIC3Q9UHC3 531 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 MTUS1Q9ULD2 1270 aa7.46□□□□□ -1.22
RTN4-203ENST00000357376 TNS2Q63HR2 1409 aa7.45□□□□□ -1.22
RTN4-203ENST00000357376 A0A087X0T9 212 aa7.45□□□□□ -1.22
RTN4-203ENST00000357376 A0A1W2PRG0 241 aa7.45□□□□□ -1.22
RTN4-203ENST00000357376 ZBTB5O15062 677 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms