RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 ELF3P78545 371 aaPredicted RBP17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 KCNB1Q14721 858 aa17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 PAIP2Q9BPZ3 127 aaKnown RBP17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 TTYH3Q9C0H2 523 aa17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 C21orf2O43822 256 aa17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 MKRN4PQ13434 485 aaPredicted RBP17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 FAM83BQ5T0W9 1011 aa17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 TBC1D9BQ66K14 1250 aa17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 USP38Q8NB14 1042 aa17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 CCDC26Q8TAB7 109 aa17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 KLHL29Q96CT2 875 aa17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 SAAL1Q96ER3 474 aa17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 PLA2G12BQ9BX93 195 aa17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 DCP1AQ9NPI6 582 aaPredicted RBP17.73■□□□□ 0.43
C2CD4A-201ENST00000355522 A0A087X0T9 212 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 FAM228BP0C875 321 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 CHN1P15882 459 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 PPP2R5BQ15173 497 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 PDXDC1Q6P996 788 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 ERGIC2Q96RQ1 377 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 N4BP2Q86UW6 1770 aaPredicted RBP17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 CCT8L1PA6NM43 557 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 ITGA4P13612 1032 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 ABCB4P21439 1286 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 MTMR3Q13615 1198 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 GNPTABQ3T906 1256 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 ZNF444Q8N0Y2 327 aaPredicted RBP17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 SEMA6BQ9H3T3 888 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 ATP6V0A4Q9HBG4 840 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 CCDC189A1A4V9 331 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 SPDYE3A6NKU9 549 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 TMEM110-MUSTN1A8MSY1 372 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 KLRC4O43908 158 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 TRAPPC10P48553 1259 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 BIRC3Q13489 604 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 NKX1-1Q15270 411 aaPredicted RBP17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 DCAF17Q5H9S7 520 aaPredicted RBP17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 ARL6IP4Q66PJ3 421 aaKnown RBP17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 CHADLQ6NUI6 762 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 SH3RF3Q8TEJ3 882 aaPredicted RBP17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 FAXDC2Q96IV6 333 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 PRMT1Q99873 361 aaKnown RBP17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 RNF14Q9UBS8 474 aa17.72■□□□□ 0.43
C2CD4A-201ENST00000355522 MPHOSPH10O00566 681 aaKnown RBP17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 HIBADHP31937 336 aaKnown RBP17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 PCK1P35558 622 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 COA7Q96BR5 231 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 XPO6Q96QU8 1125 aaKnown RBP17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 LBHD1Q9BQE6 289 aaPredicted RBP17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 GPCPD1Q9NPB8 672 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 FBXO3Q9UK99 471 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 PGRMC1O00264 195 aaKnown RBP17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 RIMBP2O15034 1052 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 CAND2O75155 1236 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 GLIS3Q8NEA6 775 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 LMBR1Q8WVP7 490 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 NEUROG2Q9H2A3 272 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 PLCB1Q9NQ66 1216 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 MYH2Q9UKX2 1941 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 SCN11AQ9UI33 1791 aa17.71■□□□□ 0.43
C2CD4A-201ENST00000355522 ITIH3Q06033 890 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 DENND2CQ68D51 928 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 LRRC34Q8IZ02 419 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 RUBCNQ92622 972 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 CRNKL1Q9BZJ0 848 aaKnown RBP17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 NOP53Q9NZM5 478 aaKnown RBP17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 NOC2LQ9Y3T9 749 aaKnown RBP17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 COL5A2P05997 1499 aaPredicted RBP17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 LRRC47Q8N1G4 583 aaKnown RBP17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 NSRP1Q9H0G5 558 aaKnown RBP17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 ISCUQ9H1K1 167 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 AZI2Q9H6S1 392 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 PCDHA4Q9UN74 947 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 CNTNAP5Q8WYK1 1306 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 GNPATO15228 680 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 EVI5O60447 810 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 CAMTA2O94983 1202 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 OR52Z1P0C646 297 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 HSPA9P38646 679 aaKnown RBP17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 WLSQ5T9L3 541 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 RNF10Q8N5U6 811 aaKnown RBP17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 FMO2Q99518 471 aa17.7■□□□□ 0.42
C2CD4A-201ENST00000355522 SERPING1P05155 500 aa17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 PDHA1P08559 390 aa17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 TAL1P17542 331 aaPredicted RBP17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 SNAP25P60880 206 aa17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 LACTBP83111 547 aaPredicted RBP17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 HOOK3Q86VS8 718 aa17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 SNX24Q9Y343 169 aa17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 CUL1Q13616 776 aa17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 PFKFB3Q16875 520 aaPredicted RBP17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 AGAP11Q8TF27 550 aa17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 PANK4Q9NVE7 773 aa17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 FAM196BA6NMK8 535 aa17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 NTSR2O95665 410 aa17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 ZNF211Q13398 564 aaPredicted RBP17.69■□□□□ 0.42
C2CD4A-201ENST00000355522 NFIXQ14938 502 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms