RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 N4BP2L2Q92802 583 aaPredicted RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 ZBTB18Q99592 522 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 WDR11Q9BZH6 1224 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 INO80BQ9C086 356 aaPredicted RBP16.04■□□□□ 0.16
LMX1B-201ENST00000355497 GINM1Q9NU53 330 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 LRFN2Q9ULH4 789 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 H3BRJ5 948 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 UBXN2AP68543 259 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 KIF19Q2TAC6 998 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 KIAA0825Q8IV33 1275 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 TRIM59Q8IWR1 403 aa16.04■□□□□ 0.16
LMX1B-201ENST00000355497 UGGT2Q9NYU1 1516 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 TADA3O75528 432 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 GCFC2P16383 781 aaKnown RBP16.03■□□□□ 0.16
LMX1B-201ENST00000355497 CCND2P30279 289 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 EIF4A3P38919 411 aaKnown RBP16.03■□□□□ 0.16
LMX1B-201ENST00000355497 C11orf57Q6ZUT1 292 aaPredicted RBP16.03■□□□□ 0.16
LMX1B-201ENST00000355497 DCPSQ96C86 337 aaKnown RBP16.03■□□□□ 0.16
LMX1B-201ENST00000355497 FMO2Q99518 471 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 FNDC3AQ9Y2H6 1198 aaKnown RBP16.03■□□□□ 0.16
LMX1B-201ENST00000355497 TFAMQ00059 246 aaKnown RBP16.03■□□□□ 0.16
LMX1B-201ENST00000355497 MYO1EQ12965 1108 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 BBS9Q3SYG4 887 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 EXOC4Q96A65 974 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 LRRC4Q9HBW1 653 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 WDR64B1ANS9 1081 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 hCG_1984214I3L0E3 225 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 DCTN3O75935 186 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 HSPA4LO95757 839 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 EPHB1P54762 984 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 FKBP3Q00688 224 aaKnown RBP16.03■□□□□ 0.16
LMX1B-201ENST00000355497 CUL1Q13616 776 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 DPCR1Q3MIW9 517 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 CRLF3Q8IUI8 442 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 ZNF713Q8N859 430 aaPredicted RBP16.03■□□□□ 0.16
LMX1B-201ENST00000355497 PARD6BQ9BYG5 372 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 PMLP29590 882 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 PKP1Q13835 747 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 PYROXD1Q8WU10 500 aa16.03■□□□□ 0.16
LMX1B-201ENST00000355497 LSG1Q9H089 658 aaKnown RBP16.03■□□□□ 0.16
LMX1B-201ENST00000355497 PPARGP37231 505 aaPredicted RBP16.02■□□□□ 0.16
LMX1B-201ENST00000355497 HIBCHQ6NVY1 386 aaPredicted RBP16.02■□□□□ 0.16
LMX1B-201ENST00000355497 NCLNQ969V3 563 aa16.02■□□□□ 0.16
LMX1B-201ENST00000355497 TMEM247A6NEH6 219 aa16.02■□□□□ 0.16
LMX1B-201ENST00000355497 ANXA13P27216 316 aa16.02■□□□□ 0.16
LMX1B-201ENST00000355497 ANGPTL8Q6UXH0 198 aa16.02■□□□□ 0.16
LMX1B-201ENST00000355497 SYT2Q8N9I0 419 aaPredicted RBP16.02■□□□□ 0.16
LMX1B-201ENST00000355497 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.02■□□□□ 0.16
LMX1B-201ENST00000355497 ZBED1O96006 694 aa16.02■□□□□ 0.15
LMX1B-201ENST00000355497 HOXA7P31268 230 aaPredicted RBP16.02■□□□□ 0.15
LMX1B-201ENST00000355497 OCA2Q04671 838 aa16.02■□□□□ 0.15
LMX1B-201ENST00000355497 TBC1D10BQ4KMP7 808 aaPredicted RBP16.02■□□□□ 0.15
LMX1B-201ENST00000355497 LRRC24Q50LG9 513 aa16.02■□□□□ 0.15
LMX1B-201ENST00000355497 CYTH2Q99418 400 aa16.02■□□□□ 0.15
LMX1B-201ENST00000355497 LMCD1Q9NZU5 365 aa16.02■□□□□ 0.15
LMX1B-201ENST00000355497 TTLL1O95922 423 aa16.02■□□□□ 0.15
LMX1B-201ENST00000355497 PYGLP06737 847 aa16.02■□□□□ 0.15
LMX1B-201ENST00000355497 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.15
LMX1B-201ENST00000355497 ZBED6P86452 979 aa16.02■□□□□ 0.15
LMX1B-201ENST00000355497 DPP9Q86TI2 863 aa16.02■□□□□ 0.15
LMX1B-201ENST00000355497 C7orf31Q8N865 590 aa16.02■□□□□ 0.15
LMX1B-201ENST00000355497 ARHGEF12Q9NZN5 1544 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 NPC1L1Q9UHC9 1359 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 PCCAP05165 728 aaPredicted RBP16.01■□□□□ 0.15
LMX1B-201ENST00000355497 CA4P22748 312 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 SEPT2Q15019 361 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 TAF1BQ53T94 588 aaPredicted RBP16.01■□□□□ 0.15
LMX1B-201ENST00000355497 ZBTB33Q86T24 672 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 AP1M1Q9BXS5 423 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 NXF1Q9UBU9 619 aaKnown RBP16.01■□□□□ 0.15
LMX1B-201ENST00000355497 ARHGEF37A1IGU5 675 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 CCDC151A5D8V7 595 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 PSMD2Q13200 908 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 TMEM259Q4ZIN3 620 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 NUDCD3Q8IVD9 361 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 EXT2Q93063 718 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 CEP170P1Q96L14 293 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 CCDC17Q96LX7 622 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 AP5M1Q9H0R1 490 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 SUN2Q9UH99 717 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 LAMC3Q9Y6N6 1575 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 SEMA3EO15041 775 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 IFNA8P32881 189 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 PTPN21Q16825 1174 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 ARL13BQ3SXY8 428 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 GRAMD4Q6IC98 578 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 RASGRP4Q8TDF6 673 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 USP14P54578 494 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 CCNA1P78396 465 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 TTLL7Q6ZT98 887 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 USP44Q9H0E7 712 aa16.01■□□□□ 0.15
LMX1B-201ENST00000355497 ZSCAN20P17040 1043 aaPredicted RBP16■□□□□ 0.15
LMX1B-201ENST00000355497 PAMP19021 973 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 PDIK1LQ8N165 341 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 HEXIM2Q96MH2 286 aaKnown RBP16■□□□□ 0.15
LMX1B-201ENST00000355497 TSC22D3Q99576 134 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 TMEM60Q9H2L4 133 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 NOP53Q9NZM5 478 aaKnown RBP16■□□□□ 0.15
LMX1B-201ENST00000355497 SLC8A2Q9UPR5 921 aa16■□□□□ 0.15
LMX1B-201ENST00000355497 UHRF1BP1Q6BDS2 1440 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms