RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 UBA7P41226 1012 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 PPP2R2AP63151 447 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 PPP1R7Q15435 360 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 LRIG3Q6UXM1 1119 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 TPTE2Q6XPS3 522 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 FAM114A1Q8IWE2 563 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 PROCA1Q8NCQ7 364 aaPredicted RBP20.46■□□□□ 0.87
SCARF1-202ENST00000348987 TATDN2Q93075 761 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 STAMBPL1Q96FJ0 436 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 RSRC1Q96IZ7 334 aaKnown RBP20.46■□□□□ 0.87
SCARF1-202ENST00000348987 TMEM47Q9BQJ4 181 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 TSKSQ9UJT2 592 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 STXBP3O00186 592 aa20.45■□□□□ 0.86
SCARF1-202ENST00000348987 LDHBP07195 334 aaKnown RBP20.45■□□□□ 0.86
SCARF1-202ENST00000348987 FCER1AP12319 257 aa20.45■□□□□ 0.86
SCARF1-202ENST00000348987 SF3A3Q12874 501 aaKnown RBP eCLIP20.45■□□□□ 0.86
SCARF1-202ENST00000348987 DDX42Q86XP3 938 aaKnown RBP eCLIP20.45■□□□□ 0.86
SCARF1-202ENST00000348987 NOVA2Q9UNW9 492 aaKnown RBP20.45■□□□□ 0.86
SCARF1-202ENST00000348987 SIK3Q9Y2K2 1263 aa20.45■□□□□ 0.86
SCARF1-202ENST00000348987 BICDL2A1A5D9 508 aa20.45■□□□□ 0.86
SCARF1-202ENST00000348987 ERVK-9P63128 1117 aa20.45■□□□□ 0.86
SCARF1-202ENST00000348987 PDE4DQ08499 809 aa20.45■□□□□ 0.86
SCARF1-202ENST00000348987 CUL5Q93034 780 aa20.45■□□□□ 0.86
SCARF1-202ENST00000348987 NYXQ9GZU5 481 aa20.45■□□□□ 0.86
SCARF1-202ENST00000348987 BUB1BO60566 1050 aaPredicted RBP20.44■□□□□ 0.86
SCARF1-202ENST00000348987 DNAJC8O75937 253 aaPredicted RBP20.44■□□□□ 0.86
SCARF1-202ENST00000348987 ECHS1P30084 290 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 IRX1P78414 480 aaPredicted RBP20.44■□□□□ 0.86
SCARF1-202ENST00000348987 EHHADHQ08426 723 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 MYO1EQ12965 1108 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 CCDC178Q5BJE1 867 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 FAM196AQ6ZSG2 479 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 RNF10Q8N5U6 811 aaKnown RBP20.44■□□□□ 0.86
SCARF1-202ENST00000348987 NSMCE1Q8WV22 266 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 SH3GLB2Q9NR46 395 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 KBTBD4Q9NVX7 518 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 BARHL2Q9NY43 387 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 NBPF9Q3BBW0 867 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 CHADLQ6NUI6 762 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 HPS3Q969F9 1004 aa20.44■□□□□ 0.86
SCARF1-202ENST00000348987 KIF3CO14782 793 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 SLC8A3P57103 927 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 TXNRD1Q16881 649 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 ASTE1Q2TB18 679 aaPredicted RBP20.43■□□□□ 0.86
SCARF1-202ENST00000348987 C11orf91Q3C1V1 193 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 MAB21L3Q8N8X9 362 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 CEP120Q8N960 986 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 ISCUQ9H1K1 167 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 KDM4CQ9H3R0 1056 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 NDST4Q9H3R1 872 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 LRRC4BQ9NT99 713 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 PPIP5K2O43314 1243 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 RASA1P20936 1047 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 RFC4P35249 363 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 MAGOHP61326 146 aaKnown RBP20.43■□□□□ 0.86
SCARF1-202ENST00000348987 VWA3BQ502W6 1294 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 TDRD12Q587J7 1177 aaKnown RBP20.43■□□□□ 0.86
SCARF1-202ENST00000348987 UBLCP1Q8WVY7 318 aaPredicted RBP20.43■□□□□ 0.86
SCARF1-202ENST00000348987 ANKS1AQ92625 1134 aa20.43■□□□□ 0.86
SCARF1-202ENST00000348987 MAGOHBQ96A72 148 aaKnown RBP20.43■□□□□ 0.86
SCARF1-202ENST00000348987 INPP4AQ96PE3 977 aaPredicted RBP20.43■□□□□ 0.86
SCARF1-202ENST00000348987 KLRF2D3W0D1 207 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 PLCG1P19174 1290 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 CALRP27797 417 aaKnown RBP20.42■□□□□ 0.86
SCARF1-202ENST00000348987 GCKP35557 465 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 GRIK3Q13003 919 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 BIRC3Q13489 604 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 BIRC2Q13490 618 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 LETM2Q2VYF4 491 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 USP17L2Q6R6M4 530 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 RUFY4Q6ZNE9 571 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 ZNF444Q8N0Y2 327 aaPredicted RBP20.42■□□□□ 0.86
SCARF1-202ENST00000348987 TCP11Q8WWU5 503 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 SPDL1Q96EA4 605 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 NEUROG2Q9H2A3 272 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 L3MBTL1Q9Y468 752 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 LAMB1P07942 1786 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 FLT1P17948 1338 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 GRID2IPA4D2P6 1211 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 PALM3A6NDB9 673 aaPredicted RBP20.42■□□□□ 0.86
SCARF1-202ENST00000348987 F8W031 263 aaPredicted RBP20.42■□□□□ 0.86
SCARF1-202ENST00000348987 FLT3P36888 993 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 ZKSCAN8Q15776 578 aaPredicted RBP20.42■□□□□ 0.86
SCARF1-202ENST00000348987 USP38Q8NB14 1042 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 MDM1Q8TC05 714 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 BAP1Q92560 729 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 HOOK2Q96ED9 719 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 VAT1LQ9HCJ6 419 aa20.42■□□□□ 0.86
SCARF1-202ENST00000348987 CLTAP09496 248 aa20.41■□□□□ 0.86
SCARF1-202ENST00000348987 DRD4P21917 467 aa20.41■□□□□ 0.86
SCARF1-202ENST00000348987 TNNC1P63316 161 aa20.41■□□□□ 0.86
SCARF1-202ENST00000348987 ARMC9Q7Z3E5 817 aa20.41■□□□□ 0.86
SCARF1-202ENST00000348987 TRIM37O94972 964 aa20.41■□□□□ 0.86
SCARF1-202ENST00000348987 SPTY2D1Q68D10 685 aaPredicted RBP20.41■□□□□ 0.86
SCARF1-202ENST00000348987 PNMA8AQ86V59 439 aaPredicted RBP20.41■□□□□ 0.86
SCARF1-202ENST00000348987 RNF217Q8TC41 542 aa20.41■□□□□ 0.86
SCARF1-202ENST00000348987 ZNF483Q8TF39 744 aaPredicted RBP20.41■□□□□ 0.86
SCARF1-202ENST00000348987 IQCDQ96DY2 449 aa20.41■□□□□ 0.86
SCARF1-202ENST00000348987 EBF2Q9HAK2 575 aa20.41■□□□□ 0.86
SCARF1-202ENST00000348987 LRRC4CQ9HCJ2 640 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms