RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 EIF4A3P38919 411 aaKnown RBP20.2■□□□□ 0.82
UBE3C-201ENST00000348165 FAM49AQ9H0Q0 323 aaPredicted RBP20.2■□□□□ 0.82
UBE3C-201ENST00000348165 SNX25Q9H3E2 840 aa20.2■□□□□ 0.82
UBE3C-201ENST00000348165 SPTLC3Q9NUV7 552 aa20.2■□□□□ 0.82
UBE3C-201ENST00000348165 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
UBE3C-201ENST00000348165 SOWAHDA6NJG2 315 aa20.2■□□□□ 0.82
UBE3C-201ENST00000348165 CXCR5P32302 372 aa20.2■□□□□ 0.82
UBE3C-201ENST00000348165 MROH7-TTC4A0A0A0MT08 1334 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 CDC25BP30305 580 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 ATP11AP98196 1134 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 MB21D2Q8IYB1 491 aaPredicted RBP20.19■□□□□ 0.82
UBE3C-201ENST00000348165 SH3GLB2Q9NR46 395 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 HOMER3Q9NSC5 361 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 RNF40O75150 1001 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 CSPG5O95196 566 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 RNASELQ05823 741 aaKnown RBP20.19■□□□□ 0.82
UBE3C-201ENST00000348165 SPP2Q13103 211 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 ZBED6P86452 979 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 CUL4BQ13620 913 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 RFX6Q8HWS3 928 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 LY9Q9HBG7 655 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 PASKQ96RG2 1323 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 CDC27P30260 824 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 AP3B2Q13367 1082 aa20.19■□□□□ 0.82
UBE3C-201ENST00000348165 FTCDO95954 541 aa20.18■□□□□ 0.82
UBE3C-201ENST00000348165 C4orf50Q6ZRC1 276 aa20.18■□□□□ 0.82
UBE3C-201ENST00000348165 ZMYND10O75800 440 aa20.18■□□□□ 0.82
UBE3C-201ENST00000348165 GCKP35557 465 aa20.18■□□□□ 0.82
UBE3C-201ENST00000348165 THAP9Q9H5L6 903 aa20.18■□□□□ 0.82
UBE3C-201ENST00000348165 ZSCAN20P17040 1043 aaPredicted RBP20.18■□□□□ 0.82
UBE3C-201ENST00000348165 NT5C2P49902 561 aa20.18■□□□□ 0.82
UBE3C-201ENST00000348165 TRIM28Q13263 835 aaKnown RBP20.18■□□□□ 0.82
UBE3C-201ENST00000348165 RINT1Q6NUQ1 792 aa20.18■□□□□ 0.82
UBE3C-201ENST00000348165 OVOS2A0A0G2JMS6 1433 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 OVOS2A0A0J9YW53 1432 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 OVOS2Q6IE36 1432 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 YWHAGP61981 247 aaKnown RBP eCLIP20.17■□□□□ 0.82
UBE3C-201ENST00000348165 SNX1Q13596 522 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 ARHGEF6Q15052 776 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 AP1ARQ63HQ0 302 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 RPAINQ86UA6 219 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 TYW1Q9NV66 732 aaKnown RBP20.17■□□□□ 0.82
UBE3C-201ENST00000348165 MYO3BQ8WXR4 1341 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 F5H6K3 240 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 PPFIA4O75335 1185 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 GNGT1P63211 74 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 KLRC3Q07444 240 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 MTMR1Q13613 665 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 SCARA5Q6ZMJ2 495 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 VSTM4Q8IW00 320 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 MIPOL1Q8TD10 442 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 THNSL1Q8IYQ7 743 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 TMEM260Q9NX78 707 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 TACC3Q9Y6A5 838 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 SGK1O00141 431 aa20.17■□□□□ 0.82
UBE3C-201ENST00000348165 NFX1Q12986 1120 aaKnown RBP20.17■□□□□ 0.82
UBE3C-201ENST00000348165 RC3H1Q5TC82 1133 aaKnown RBP20.17■□□□□ 0.82
UBE3C-201ENST00000348165 KRT31Q15323 416 aa20.16■□□□□ 0.82
UBE3C-201ENST00000348165 RESP18Q5W5W9 173 aa20.16■□□□□ 0.82
UBE3C-201ENST00000348165 RCSD1Q6JBY9 416 aa20.16■□□□□ 0.82
UBE3C-201ENST00000348165 ARPP19P56211 112 aa20.16■□□□□ 0.82
UBE3C-201ENST00000348165 SNRNP48Q6IEG0 339 aaKnown RBP20.16■□□□□ 0.82
UBE3C-201ENST00000348165 LRRC63Q05C16 580 aa20.16■□□□□ 0.82
UBE3C-201ENST00000348165 SLC27A3Q5K4L6 730 aa20.16■□□□□ 0.82
UBE3C-201ENST00000348165 MSTO1Q9BUK6 570 aa20.16■□□□□ 0.82
UBE3C-201ENST00000348165 NHEJ1Q9H9Q4 299 aaPredicted RBP20.16■□□□□ 0.82
UBE3C-201ENST00000348165 ADAMTS1Q9UHI8 967 aa20.16■□□□□ 0.82
UBE3C-201ENST00000348165 MOCS3O95396 460 aa20.16■□□□□ 0.82
UBE3C-201ENST00000348165 EN1Q05925 392 aaPredicted RBP20.16■□□□□ 0.82
UBE3C-201ENST00000348165 TRIM11Q96F44 468 aa20.16■□□□□ 0.82
UBE3C-201ENST00000348165 LRFN2Q9ULH4 789 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 E9PMD0 336 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 POC1B-GALNT4F8VUJ3 575 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 DYNLT1P63172 113 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 TCP11X2Q5H9J9 407 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 DNAJC24Q6P3W2 148 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 CCNYQ8ND76 341 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 HOXC10Q9NYD6 342 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 ATG9AQ7Z3C6 839 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 METTL23Q86XA0 190 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 PNMA3Q9UL41 463 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 CRB1P82279 1406 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 GLI2P10070 1586 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 ZBTB24O43167 697 aaPredicted RBP20.15■□□□□ 0.82
UBE3C-201ENST00000348165 TROVE2P10155 538 aaKnown RBP eCLIP20.15■□□□□ 0.82
UBE3C-201ENST00000348165 KIF11P52732 1056 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 ARHGAP4P98171 946 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 ALX1Q15699 326 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 USP31Q70CQ4 1352 aa20.15■□□□□ 0.82
UBE3C-201ENST00000348165 ZNF233A6NK53 670 aa20.14■□□□□ 0.82
UBE3C-201ENST00000348165 KCTD16Q68DU8 428 aa20.14■□□□□ 0.82
UBE3C-201ENST00000348165 OR6B2Q6IFH4 312 aa20.14■□□□□ 0.82
UBE3C-201ENST00000348165 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.14■□□□□ 0.82
UBE3C-201ENST00000348165 DAAM1Q9Y4D1 1078 aa20.14■□□□□ 0.82
UBE3C-201ENST00000348165 IQGAP3Q86VI3 1631 aa20.14■□□□□ 0.82
UBE3C-201ENST00000348165 KIAA1841Q6NSI8 718 aa20.14■□□□□ 0.81
UBE3C-201ENST00000348165 CALN1Q9BXU9 219 aa20.14■□□□□ 0.81
UBE3C-201ENST00000348165 PPP1R12CQ9BZL4 782 aa20.14■□□□□ 0.81
UBE3C-201ENST00000348165 CHRNA5P30532 468 aa20.14■□□□□ 0.81
UBE3C-201ENST00000348165 RPS6KA2Q15349 733 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms