RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SELPP16109 830 aa16.51■□□□□ 0.23
HMGN3-202ENST00000344726 ATP2A2P16615 1042 aaKnown RBP16.51■□□□□ 0.23
HMGN3-202ENST00000344726 IFNAR1P17181 557 aa16.51■□□□□ 0.23
HMGN3-202ENST00000344726 SP4Q02446 784 aa16.51■□□□□ 0.23
HMGN3-202ENST00000344726 RAB30Q15771 203 aa16.51■□□□□ 0.23
HMGN3-202ENST00000344726 ZNF618Q5T7W0 954 aa16.51■□□□□ 0.23
HMGN3-202ENST00000344726 PRDM12Q9H4Q4 367 aa16.51■□□□□ 0.23
HMGN3-202ENST00000344726 TUT1Q9H6E5 874 aaKnown RBP16.51■□□□□ 0.23
HMGN3-202ENST00000344726 JADE2Q9NQC1 790 aa16.51■□□□□ 0.23
HMGN3-202ENST00000344726 PKD2L1Q9P0L9 805 aa16.51■□□□□ 0.23
HMGN3-202ENST00000344726 FOSP01100 380 aaPredicted RBP16.5■□□□□ 0.23
HMGN3-202ENST00000344726 CXCL10P02778 98 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 SMIM10L2AP0DMW4 78 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 SMIM10L2BP0DMW5 78 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 MTMR1Q13613 665 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 ADGRE1Q14246 886 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 TMCO2Q7Z6W1 182 aaPredicted RBP16.5■□□□□ 0.23
HMGN3-202ENST00000344726 SERINC5Q86VE9 423 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 TEX2Q8IWB9 1127 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 CCDC155Q8N6L0 562 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 USP38Q8NB14 1042 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 MXRA8Q9BRK3 442 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 SLC26A6Q9BXS9 759 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 OSBPL7Q9BZF2 842 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 FTOQ9C0B1 505 aaKnown RBP eCLIP16.5■□□□□ 0.23
HMGN3-202ENST00000344726 ZMYND12Q9H0C1 365 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 MSRAQ9UJ68 235 aa16.5■□□□□ 0.23
HMGN3-202ENST00000344726 GSTTP1A0A1W2PQM5 241 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 ESYT2A0FGR8 921 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 TREHO43280 583 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 SREBF1P36956 1147 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 AP3B2Q13367 1082 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 UTP14CQ5TAP6 766 aaKnown RBP16.49■□□□□ 0.23
HMGN3-202ENST00000344726 JAKMIP3Q5VZ66 844 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.49■□□□□ 0.23
HMGN3-202ENST00000344726 CRYGNQ8WXF5 182 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
HMGN3-202ENST00000344726 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 RNF26Q9BY78 433 aaPredicted RBP16.49■□□□□ 0.23
HMGN3-202ENST00000344726 RNPEPQ9H4A4 650 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 EHMT1Q9H9B1 1298 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 KCNH7Q9NS40 1196 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 PDRG1Q9NUG6 133 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 PCDHA11Q9Y5I1 949 aa16.49■□□□□ 0.23
HMGN3-202ENST00000344726 C17orf102A2RUQ5 167 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 SEC24BO95487 1268 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 ARP10275 920 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 ACTN1P12814 892 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 DEFB103AP81534 67 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 STK3Q13188 491 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 SPRED2Q7Z698 418 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 GIMAP8Q8ND71 665 aaPredicted RBP16.48■□□□□ 0.23
HMGN3-202ENST00000344726 GLT8D2Q9H1C3 349 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 SLC28A3Q9HAS3 691 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 SETD4Q9NVD3 440 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 REV3LO60673 3130 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 TRANK1O15050 2925 aa16.48■□□□□ 0.23
HMGN3-202ENST00000344726 SIP14410 1827 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 MEIS1O00470 390 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 MAFGO15525 162 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 CA3P07451 260 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 TCF7P36402 384 aaPredicted RBP16.47■□□□□ 0.23
HMGN3-202ENST00000344726 WDR5P61964 334 aaKnown RBP16.47■□□□□ 0.23
HMGN3-202ENST00000344726 ADAM17P78536 824 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 ARHGAP4P98171 946 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 CEP55Q53EZ4 464 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 PPP2R2DQ66LE6 453 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 HERC6Q8IVU3 1022 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 RASGRP4Q8TDF6 673 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 ATP6V0A1Q93050 837 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 SLC9A7Q96T83 725 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 VPS54Q9P1Q0 977 aa16.47■□□□□ 0.23
HMGN3-202ENST00000344726 MYH9P35579 1960 aaKnown RBP16.47■□□□□ 0.23
HMGN3-202ENST00000344726 MICAL3Q7RTP6 2002 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 FAM86B1E9PN63 330 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 DLL1O00548 723 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 BAIAP3O94812 1187 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 FAM86B2P0C5J1 330 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 THPOP40225 353 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 ANAPC15P60006 121 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 AKAP17AQ02040 695 aaKnown RBP16.46■□□□□ 0.23
HMGN3-202ENST00000344726 ITGB3BPQ13352 177 aaPredicted RBP16.46■□□□□ 0.23
HMGN3-202ENST00000344726 CNKSR3Q6P9H4 555 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 REXO1Q8N1G1 1221 aaKnown RBP16.46■□□□□ 0.23
HMGN3-202ENST00000344726 PHOSPHO2Q8TCD6 241 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.23
HMGN3-202ENST00000344726 LMBR1Q8WVP7 490 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 SEPT1Q8WYJ6 367 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 IL17RAQ96F46 866 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 PCYT2Q99447 389 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 C6orf50Q9HD87 102 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 LOXHD1Q8IVV2 1947 aa16.46■□□□□ 0.23
HMGN3-202ENST00000344726 CUL9Q8IWT3 2517 aa16.45■□□□□ 0.22
HMGN3-202ENST00000344726 IGLV3-22A0A075B6J6 115 aa16.45■□□□□ 0.22
HMGN3-202ENST00000344726 EPOPA6NHQ4 379 aa16.45■□□□□ 0.22
HMGN3-202ENST00000344726 EDIL3O43854 480 aa16.45■□□□□ 0.22
HMGN3-202ENST00000344726 DTNBO60941 627 aa16.45■□□□□ 0.22
HMGN3-202ENST00000344726 SCRN1Q12765 414 aa16.45■□□□□ 0.22
HMGN3-202ENST00000344726 SPDYE1Q8NFV5 336 aaPredicted RBP16.45■□□□□ 0.22
HMGN3-202ENST00000344726 AIFM3Q96NN9 605 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms