RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 SIGLEC14Q08ET2 396 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 ADAM15Q13444 863 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 GORABQ5T7V8 394 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 DRC1Q96MC2 740 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 DCTPP1Q9H773 170 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 SLC28A3Q9HAS3 691 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 TRPV5Q9NQA5 729 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 TOMM22Q9NS69 142 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 LCMT1Q9UIC8 334 aa8.33□□□□□ -1.08
ZNF540-202ENST00000343599 PDCD11Q14690 1871 aaKnown RBP8.32□□□□□ -1.08
ZNF540-202ENST00000343599 CCDC171Q6TFL3 1326 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 SOWAHBA6NEL2 793 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 TCP10Q12799 353 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 DEF6Q9H4E7 631 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 CNNM2Q9H8M5 875 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 GDPD2Q9HCC8 539 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 C11orf16Q9NQ32 467 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 ST7Q9NRC1 585 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 ATP11BQ9Y2G3 1177 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 MRPL11Q9Y3B7 192 aaKnown RBP8.32□□□□□ -1.08
ZNF540-202ENST00000343599 GPR37O15354 613 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 POLR3DP05423 398 aaPredicted RBP8.32□□□□□ -1.08
ZNF540-202ENST00000343599 EEF2P13639 858 aaKnown RBP8.32□□□□□ -1.08
ZNF540-202ENST00000343599 ZAP70P43403 619 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 WDR5P61964 334 aaKnown RBP8.32□□□□□ -1.08
ZNF540-202ENST00000343599 TTC31Q49AM3 519 aaPredicted RBP8.32□□□□□ -1.08
ZNF540-202ENST00000343599 ELMSAN1Q6PJG2 1045 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 CLEC4DQ8WXI8 215 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 SNX27Q96L92 541 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 MEIS3Q99687 375 aa8.32□□□□□ -1.08
ZNF540-202ENST00000343599 CWC15Q9P013 229 aaKnown RBP8.32□□□□□ -1.08
ZNF540-202ENST00000343599 KLHL33A6NCF5 533 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 AKAP3O75969 853 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 MBD3O95983 291 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 SSR1P43307 286 aaKnown RBP8.31□□□□□ -1.08
ZNF540-202ENST00000343599 EPHB4P54760 987 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 IKBKEQ14164 716 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 LRCH2Q5VUJ6 765 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 KRBA2Q6ZNG9 492 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 STOX1Q6ZVD7 989 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 IQUBQ8NA54 791 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 TOP1MTQ969P6 601 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 GPRASP2Q96D09 838 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 ATG4CQ96DT6 458 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 OXCT2Q9BYC2 517 aaPredicted RBP8.31□□□□□ -1.08
ZNF540-202ENST00000343599 KCNF1Q9H3M0 494 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 AATFQ9NY61 560 aaKnown RBP eCLIP8.31□□□□□ -1.08
ZNF540-202ENST00000343599 YBX2Q9Y2T7 364 aaKnown RBP8.31□□□□□ -1.08
ZNF540-202ENST00000343599 F5H6K3 240 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 SMIM22K7EJ46 135 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 EFEMP2O95967 443 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 NDUFB10O96000 172 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 CALRP27797 417 aaKnown RBP8.31□□□□□ -1.08
ZNF540-202ENST00000343599 ITIH3Q06033 890 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 KLRC3Q07444 240 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 SEPT2Q15019 361 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 PACS2Q86VP3 889 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 PPFIBP1Q86W92 1011 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 SEPT8Q92599 483 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 CEP89Q96ST8 783 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 CCDC196A0A1B0GTZ2 297 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 GSG1L2A8MUP6 293 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 CD2BP2O95400 341 aaKnown RBP8.31□□□□□ -1.08
ZNF540-202ENST00000343599 STAG3L1P0CL83 205 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 C7P10643 843 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 CASTP20810 708 aaKnown RBP8.31□□□□□ -1.08
ZNF540-202ENST00000343599 CACNB3P54284 484 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 ZXDAP98168 799 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 POU5F1BQ06416 359 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 GRB10Q13322 594 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 BMS1Q14692 1282 aaKnown RBP8.31□□□□□ -1.08
ZNF540-202ENST00000343599 DGKDQ16760 1214 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 CCDC144BQ3MJ40 725 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 FAM47AQ5JRC9 791 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 ZNF365Q70YC5 407 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 LRRC8DQ7L1W4 858 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 PLPPR4Q7Z2D5 763 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 OTUD6BQ8N6M0 293 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 RNF214Q8ND24 703 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 EAF2Q96CJ1 260 aaPredicted RBP8.31□□□□□ -1.08
ZNF540-202ENST00000343599 RTP3Q9BQQ7 232 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 AAASQ9NRG9 546 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 ECHDC1Q9NTX5 307 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 PYCARDQ9ULZ3 195 aa8.31□□□□□ -1.08
ZNF540-202ENST00000343599 ZNF532Q9HCE3 1301 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 TREHO43280 583 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 BCAR3O75815 825 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 FLOT1O75955 427 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 OS9Q13438 667 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-202ENST00000343599 HDAC1Q13547 482 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-202ENST00000343599 TEX35Q5T0J7 233 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 PPP2R2DQ66LE6 453 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 PDXDC1Q6P996 788 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 CCDC51Q96ER9 411 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 DSCC1Q9BVC3 393 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 RWDD1Q9H446 243 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-202ENST00000343599 ZMYM5Q9UJ78 669 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 MCM3APO60318 1980 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 PRR5-ARHGAP8B1AHC4 643 aa8.3□□□□□ -1.08
ZNF540-202ENST00000343599 SLC26A4O43511 780 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms