RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 KLRF2D3W0D1 207 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 IFNAR2P48551 515 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 SRPK1Q96SB4 655 aaKnown RBP13.7□□□□□ -0.22
RERE-201ENST00000337907 SLC39A2Q9NP94 309 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 CCDC78A2IDD5 438 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 NEMP1O14524 444 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 TFAMQ00059 246 aaKnown RBP13.7□□□□□ -0.22
RERE-201ENST00000337907 TCP11X2Q5H9J9 407 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 RPF1Q9H9Y2 349 aaKnown RBP13.7□□□□□ -0.22
RERE-201ENST00000337907 ZBED1O96006 694 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 AARSP49588 968 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■■■■ 51.5
RERE-201ENST00000337907 EIF3BP55884 814 aaKnown RBP13.7□□□□□ -0.22
RERE-201ENST00000337907 ZNF445P59923 1031 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 DYNLT1P63172 113 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 Q3C1V9 767 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 SPATA1Q5VX52 437 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 RWDD4Q6NW29 188 aaKnown RBP13.7□□□□□ -0.22
RERE-201ENST00000337907 LRRC47Q8N1G4 583 aaKnown RBP13.7□□□□□ -0.22
RERE-201ENST00000337907 EFHBQ8N7U6 833 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 GPBP1L1Q9HC44 474 aaPredicted RBP13.7□□□□□ -0.22
RERE-201ENST00000337907 KIAA1024Q9UPX6 916 aa13.7□□□□□ -0.22
RERE-201ENST00000337907 HABP4Q5JVS0 413 aaKnown RBP13.69□□□□□ -0.22
RERE-201ENST00000337907 C7orf31Q8N865 590 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 YY1AP1Q9H869 796 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 BCS1LQ9Y276 419 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 CTTNBP2Q8WZ74 1663 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 CCDC159P0C7I6 412 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 CPA1P15085 419 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 SUPT20HL1Q3ZLR7 823 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 ZNF594Q96JF6 807 aaPredicted RBP13.69□□□□□ -0.22
RERE-201ENST00000337907 WDR11Q9BZH6 1224 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 UBXN8O00124 270 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 PFKFB1P16118 471 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 ALCAMQ13740 583 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 GPATCH4Q5T3I0 446 aaKnown RBP13.69□□□□□ -0.22
RERE-201ENST00000337907 PODNQ7Z5L7 613 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 PNMA1Q8ND90 353 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 TRPV6Q9H1D0 765 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 SBNO1A3KN83 1393 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 SEPT2Q15019 361 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 CYP4F22Q6NT55 531 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 RRM2BQ7LG56 351 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 FAM227BQ96M60 508 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 DBNDD2Q9BQY9 259 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 ACTR5Q9H9F9 607 aaPredicted RBP13.69□□□□□ -0.22
RERE-201ENST00000337907 RNF14Q9UBS8 474 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 hCG_1642624A0A1W2PR95 340 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 TJP3O95049 919 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 GNAT1P11488 350 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 SMARCA1P28370 1054 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 SERPINB10P48595 397 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 MORF4L2Q15014 288 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 NAA35Q5VZE5 725 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 ALS2CLQ60I27 953 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 LRRC8BQ6P9F7 803 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 NUDT18Q6ZVK8 323 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 POLE3Q9NRF9 147 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 PHLPP2Q6ZVD8 1323 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 FOXD4Q12950 439 aaPredicted RBP13.69□□□□□ -0.22
RERE-201ENST00000337907 GRAMD1BQ3KR37 738 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 TBC1D19Q8N5T2 526 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 PYROXD1Q8WU10 500 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 GJA10Q969M2 543 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 ZFYVE19Q96K21 471 aa13.69□□□□□ -0.22
RERE-201ENST00000337907 E5RI56 91 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 TJAP1Q5JTD0 557 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 WARS2Q9UGM6 360 aaKnown RBP13.68□□□□□ -0.22
RERE-201ENST00000337907 ABCC12Q96J65 1359 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 NR2F2P24468 414 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 PSMA3P25788 255 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 MDM2Q00987 491 aaPredicted RBP13.68□□□□□ -0.22
RERE-201ENST00000337907 MMS22LQ6ZRQ5 1243 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 TTC8Q8TAM2 541 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 EXT2Q93063 718 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 PALMDQ9NP74 551 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 GCNT4Q9P109 453 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 KPNA7A9QM74 516 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 ARIH2O95376 493 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 ZKSCAN8Q15776 578 aaPredicted RBP13.68□□□□□ -0.22
RERE-201ENST00000337907 TCP11Q8WWU5 503 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 AMNQ9BXJ7 453 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 ZBTB40Q9NUA8 1239 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 ATP8A1Q9Y2Q0 1164 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 APBA3O96018 575 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 CARSP49589 748 aaKnown RBP13.68□□□□□ -0.22
RERE-201ENST00000337907 ULK4Q96C45 1275 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 HEXIM2Q96MH2 286 aaKnown RBP13.68□□□□□ -0.22
RERE-201ENST00000337907 GCP02774 474 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 CCT5P48643 541 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
RERE-201ENST00000337907 AARS2Q5JTZ9 985 aaKnown RBP13.68□□□□□ -0.22
RERE-201ENST00000337907 PLEKHM3Q6ZWE6 761 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 POLR3AO14802 1390 aaPredicted RBP13.68□□□□□ -0.22
RERE-201ENST00000337907 GOLGA8SH3BPF8 625 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 SGSM2O43147 1006 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 VAMP4O75379 141 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 ARHGEF25Q86VW2 580 aa13.68□□□□□ -0.22
RERE-201ENST00000337907 DHTKD1Q96HY7 919 aaPredicted RBP13.68□□□□□ -0.22
RERE-201ENST00000337907 DPYSL4O14531 572 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms