RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 AP3B2Q13367 1082 aa25.79■■□□□ 1.72
NDEL1-201ENST00000334527 DHX36Q9H2U1 1008 aaKnown RBP25.79■■□□□ 1.72
NDEL1-201ENST00000334527 TRIM37O94972 964 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 NAP1L1P55209 391 aaKnown RBP25.78■■□□□ 1.72
NDEL1-201ENST00000334527 SNAP25P60880 206 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 ADAM9Q13443 819 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 PRR16Q569H4 304 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 MUM1L1Q5H9M0 696 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 CCDC181Q5TID7 509 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 HAUS3Q68CZ6 603 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 KIAA0825Q8IV33 1275 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 HINFPQ9BQA5 517 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 LRRC1Q9BTT6 524 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 NRXN2Q9P2S2 1712 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 FRMD3A2A2Y4 597 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 SYF2O95926 243 aaKnown RBP25.78■■□□□ 1.72
NDEL1-201ENST00000334527 ALDH1B1P30837 517 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 EZH2Q15910 746 aaKnown RBP25.78■■□□□ 1.72
NDEL1-201ENST00000334527 MOXD1Q6UVY6 613 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 RNF10Q8N5U6 811 aaKnown RBP25.78■■□□□ 1.72
NDEL1-201ENST00000334527 ETNPPLQ8TBG4 499 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 P2RX7Q99572 595 aaKnown RBP25.78■■□□□ 1.72
NDEL1-201ENST00000334527 TMX4Q9H1E5 349 aaPredicted RBP25.78■■□□□ 1.72
NDEL1-201ENST00000334527 SMARCAL1Q9NZC9 954 aa25.78■■□□□ 1.72
NDEL1-201ENST00000334527 TRPC5Q9UL62 973 aaPredicted RBP25.78■■□□□ 1.72
NDEL1-201ENST00000334527 A0A0U1RQG5 324 aaPredicted RBP25.77■■□□□ 1.72
NDEL1-201ENST00000334527 RNF40O75150 1001 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 CAPN2P17655 700 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 EPS15P42566 896 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 MATR3P43243 847 aaKnown RBP eCLIP25.77■■□□□ 1.721e-6■■■□□ 18.7
NDEL1-201ENST00000334527 CATSPER3Q86XQ3 398 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 GOLGA5Q8TBA6 731 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 TRIM34Q9BYJ4 488 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 PI4KBQ9UBF8 816 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 FAM184BQ9ULE4 1060 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 PITPNM2Q9BZ72 1349 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 RBM5P52756 815 aaKnown RBP eCLIP25.77■■□□□ 1.72
NDEL1-201ENST00000334527 SPIRE1Q08AE8 756 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 HDAC7Q8WUI4 952 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 TLR10Q9BXR5 811 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 FAM204AQ9H8W3 233 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 EHD2Q9NZN4 543 aa25.77■■□□□ 1.72
NDEL1-201ENST00000334527 ZC3H4Q9UPT8 1303 aaKnown RBP25.77■■□□□ 1.72
NDEL1-201ENST00000334527 ACTN2P35609 894 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 ICA1Q05084 483 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 RAPGEF1Q13905 1077 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 KLHDC7AQ5VTJ3 777 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 SIAH1Q8IUQ4 282 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 ZC3H3Q8IXZ2 948 aaKnown RBP25.76■■□□□ 1.71
NDEL1-201ENST00000334527 CRYGNQ8WXF5 182 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 FAM198AQ9UFP1 575 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 MEIS1O00470 390 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 CETN3O15182 167 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 EDRF1Q3B7T1 1238 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 PPP4R3CPQ6ZMV5 832 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 AMNQ9BXJ7 453 aa25.76■■□□□ 1.71
NDEL1-201ENST00000334527 PAFAH1B1P43034 410 aa25.75■■□□□ 1.71
NDEL1-201ENST00000334527 CASP5P51878 434 aa25.75■■□□□ 1.71
NDEL1-201ENST00000334527 PSMC6P62333 389 aa25.75■■□□□ 1.71
NDEL1-201ENST00000334527 ARID5AQ03989 594 aa25.75■■□□□ 1.71
NDEL1-201ENST00000334527 USH1GQ495M9 461 aa25.75■■□□□ 1.71
NDEL1-201ENST00000334527 SH3BP5LQ7L8J4 393 aa25.75■■□□□ 1.71
NDEL1-201ENST00000334527 ERMNQ8TAM6 284 aa25.75■■□□□ 1.71
NDEL1-201ENST00000334527 LUC7LQ9NQ29 371 aaKnown RBP25.75■■□□□ 1.71
NDEL1-201ENST00000334527 DMGDHQ9UI17 866 aaKnown RBP25.75■■□□□ 1.71
NDEL1-201ENST00000334527 NR2F2P24468 414 aa25.75■■□□□ 1.71
NDEL1-201ENST00000334527 PABPC4Q13310 644 aaKnown RBP eCLIP25.75■■□□□ 1.71
NDEL1-201ENST00000334527 PODNQ7Z5L7 613 aa25.75■■□□□ 1.71
NDEL1-201ENST00000334527 AENQ8WTP8 325 aaKnown RBP25.75■■□□□ 1.71
NDEL1-201ENST00000334527 TBC1D5Q92609 795 aa25.75■■□□□ 1.71
NDEL1-201ENST00000334527 F5H6K3 240 aa25.74■■□□□ 1.71
NDEL1-201ENST00000334527 KLRC3Q07444 240 aa25.74■■□□□ 1.71
NDEL1-201ENST00000334527 KCNH2Q12809 1159 aa25.74■■□□□ 1.71
NDEL1-201ENST00000334527 IKQ13123 557 aaPredicted RBP25.74■■□□□ 1.71
NDEL1-201ENST00000334527 GIT2Q14161 759 aa25.74■■□□□ 1.71
NDEL1-201ENST00000334527 LEKR1Q6ZMV7 388 aa25.74■■□□□ 1.71
NDEL1-201ENST00000334527 DNM3Q9UQ16 869 aa25.74■■□□□ 1.71
NDEL1-201ENST00000334527 ATAD5Q96QE3 1844 aa25.74■■□□□ 1.71
NDEL1-201ENST00000334527 MRPS25P82663 173 aaKnown RBP25.74■■□□□ 1.71
NDEL1-201ENST00000334527 Q4G0T1 1027 aa25.74■■□□□ 1.71
NDEL1-201ENST00000334527 RUBCNQ92622 972 aa25.74■■□□□ 1.71
NDEL1-201ENST00000334527 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.74■■□□□ 1.71
NDEL1-201ENST00000334527 TSKSQ9UJT2 592 aa25.74■■□□□ 1.71
NDEL1-201ENST00000334527 TBX3O15119 743 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 PRPF6O94906 941 aaKnown RBP25.73■■□□□ 1.71
NDEL1-201ENST00000334527 GDF11O95390 407 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 RPA1P27694 616 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 GGCXP38435 758 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 SLC7A5Q01650 507 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 ENOX2Q16206 610 aaKnown RBP25.73■■□□□ 1.71
NDEL1-201ENST00000334527 SLC18A3Q16572 532 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 TATDN1Q6P1N9 297 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 TMEM179Q6ZVK1 233 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 FBXO11Q86XK2 927 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 NLGN1Q8N2Q7 840 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 FAM133AQ8N9E0 248 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 RIN2Q8WYP3 895 aaPredicted RBP25.73■■□□□ 1.71
NDEL1-201ENST00000334527 LENG9Q96B70 501 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 IDI2Q9BXS1 227 aa25.73■■□□□ 1.71
NDEL1-201ENST00000334527 GANQ9H2C0 597 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms