RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 KLRK1P26718 216 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 TAF1CQ15572 869 aaPredicted RBP16.36■□□□□ 0.21
C9orf47-201ENST00000334490 PADI6Q6TGC4 694 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 SRBD1Q8N5C6 995 aaKnown RBP16.36■□□□□ 0.21
C9orf47-201ENST00000334490 ENOX1Q8TC92 643 aaKnown RBP16.36■□□□□ 0.21
C9orf47-201ENST00000334490 RPF1Q9H9Y2 349 aaKnown RBP16.36■□□□□ 0.21
C9orf47-201ENST00000334490 ATP6V0A4Q9HBG4 840 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 PPANQ9NQ55 473 aaKnown RBP16.36■□□□□ 0.21
C9orf47-201ENST00000334490 BZW2Q9Y6E2 419 aaKnown RBP16.36■□□□□ 0.21
C9orf47-201ENST00000334490 E9PMD0 336 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 THAP12O43422 761 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 RPS12P25398 132 aaKnown RBP16.36■□□□□ 0.21
C9orf47-201ENST00000334490 HDXQ7Z353 690 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 MXRA7P84157 204 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 ZNF543Q08ER8 600 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 SWSAP1Q6NVH7 229 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 LPAR1Q92633 364 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 DYDC2Q96IM9 177 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 POLD4Q9HCU8 107 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 NKIRAS1Q9NYS0 192 aa16.36■□□□□ 0.21
C9orf47-201ENST00000334490 MYO1FO00160 1098 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 COPB2P35606 906 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 PPP2R2CQ9Y2T4 447 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 ZNF233A6NK53 670 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 TDP2O95551 362 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 PTPN21Q16825 1174 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 SLC10A5Q5PT55 438 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 SLFN12LQ6IEE8 588 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 RSAD2Q8WXG1 361 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 TEX13BQ9BXU2 312 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 PLEKHA4Q9H4M7 779 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 GCNT4Q9P109 453 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 NYAP2Q9P242 653 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 GABBR1Q9UBS5 961 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 POTEB3A0JP26 581 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 POTECB2RU33 542 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 C19orf81C9J6K1 198 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 WDR46O15213 610 aaKnown RBP16.35■□□□□ 0.21
C9orf47-201ENST00000334490 ZBTB24O43167 697 aaPredicted RBP16.35■□□□□ 0.21
C9orf47-201ENST00000334490 QARSP47897 775 aaKnown RBP16.35■□□□□ 0.21
C9orf47-201ENST00000334490 POTEBQ6S5H4 581 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 AGBL3Q8NEM8 1001 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.35■□□□□ 0.21
C9orf47-201ENST00000334490 PXDNLA1KZ92 1463 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 ZNF157P51786 506 aaPredicted RBP16.35■□□□□ 0.21
C9orf47-201ENST00000334490 ARPP19P56211 112 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 MYO1EQ12965 1108 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 MAPK6Q16659 721 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 C6orf163Q5TEZ5 329 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 RESP18Q5W5W9 173 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 ZNF302Q9NR11 478 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 TMEM131LA2VDJ0 1609 aa16.35■□□□□ 0.21
C9orf47-201ENST00000334490 GPR75-ASB3A0A0A6YYF3 556 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 P4HBP07237 508 aaKnown RBP16.34■□□□□ 0.21
C9orf47-201ENST00000334490 IVLP07476 585 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 LMNB1P20700 586 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 SFNP31947 248 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 SPZ1Q9BXG8 430 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 GDAQ9Y2T3 454 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 KIAA1210Q9ULL0 1709 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 EXOSC10Q01780 885 aaKnown RBP16.34■□□□□ 0.21
C9orf47-201ENST00000334490 SURF1Q15526 300 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 GAS2L3Q86XJ1 694 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 FBF1Q8TES7 1133 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 CD58P19256 250 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 LRRC63Q05C16 580 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 ITIH3Q06033 890 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 CUL4BQ13620 913 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 MFSD14CQ5VZR4 134 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 UNC13DQ70J99 1090 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 UBE2TQ9NPD8 197 aaPredicted RBP16.34■□□□□ 0.21
C9orf47-201ENST00000334490 VPS18Q9P253 973 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 POLLQ9UGP5 575 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 RIOK3O14730 519 aaKnown RBP16.34■□□□□ 0.21
C9orf47-201ENST00000334490 CPLX4Q7Z7G2 160 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 LRRC8AQ8IWT6 810 aa16.34■□□□□ 0.21
C9orf47-201ENST00000334490 PSPC1Q8WXF1 523 aaKnown RBP16.34■□□□□ 0.21
C9orf47-201ENST00000334490 RASA1P20936 1047 aa16.33■□□□□ 0.21
C9orf47-201ENST00000334490 RASSF7Q02833 373 aa16.33■□□□□ 0.21
C9orf47-201ENST00000334490 C16orf86Q6ZW13 317 aa16.33■□□□□ 0.21
C9orf47-201ENST00000334490 SFR1Q86XK3 245 aa16.33■□□□□ 0.21
C9orf47-201ENST00000334490 HYOU1Q9Y4L1 999 aa16.33■□□□□ 0.21
C9orf47-201ENST00000334490 ASB14A6NK59 587 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 MESDQ14696 234 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 PDZD4Q76G19 769 aaPredicted RBP16.33■□□□□ 0.2
C9orf47-201ENST00000334490 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
C9orf47-201ENST00000334490 FAM81BQ96LP2 452 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 SPATA33Q96N06 139 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 VCPKMTQ9H867 229 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 CLDN3O15551 220 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 CASP1P29466 404 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 VPS41P49754 854 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 USP11P51784 963 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 RAB3IL1Q8TBN0 382 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 NEK9Q8TD19 979 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 EPB41L4AQ9HCS5 686 aaPredicted RBP16.33■□□□□ 0.2
C9orf47-201ENST00000334490 FER1L4A9Z1Z3 1794 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 ARHGEF37A1IGU5 675 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 GOLGA8SH3BPF8 625 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms