RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 HDAC6Q9UBN7 1215 aa15.9■□□□□ 0.14
LIMS1-201ENST00000332345 GTF2IRD1Q9UHL9 959 aa15.9■□□□□ 0.14
LIMS1-201ENST00000332345 TCEAL9Q9UHQ7 104 aa15.9■□□□□ 0.14
LIMS1-201ENST00000332345 A0A1W2PPC1 479 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 MMP1P03956 469 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 GNAT1P11488 350 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 ITGB3BPQ13352 177 aaPredicted RBP15.89■□□□□ 0.13
LIMS1-201ENST00000332345 INF2Q27J81 1249 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 Q4G0T1 1027 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 KRT40Q6A162 431 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 MFSD5Q6N075 450 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 MOXD1Q6UVY6 613 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 TMEM199Q8N511 208 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 OXER1Q8TDS5 423 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 PPP1R13LQ8WUF5 828 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 GLG1Q92896 1179 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 TNPO1Q92973 898 aaKnown RBP15.89■□□□□ 0.13
LIMS1-201ENST00000332345 TMX3Q96JJ7 454 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 C8orf76Q96K31 380 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 NAP1L4Q99733 375 aaKnown RBP15.89■□□□□ 0.13
LIMS1-201ENST00000332345 PRO3102Q9H379 93 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 AZI2Q9H6S1 392 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 KIF3AQ9Y496 699 aa15.89■□□□□ 0.13
LIMS1-201ENST00000332345 DHX15O43143 795 aaKnown RBP15.88■□□□□ 0.13
LIMS1-201ENST00000332345 EDIL3O43854 480 aa15.88■□□□□ 0.13
LIMS1-201ENST00000332345 ATG7O95352 703 aa15.88■□□□□ 0.13
LIMS1-201ENST00000332345 ITGB8P26012 769 aa15.88■□□□□ 0.13
LIMS1-201ENST00000332345 ACTR2P61160 394 aa15.88■□□□□ 0.13
LIMS1-201ENST00000332345 LETM2Q2VYF4 491 aa15.88■□□□□ 0.13
LIMS1-201ENST00000332345 GDF6Q6KF10 455 aaPredicted RBP15.88■□□□□ 0.13
LIMS1-201ENST00000332345 PIK3AP1Q6ZUJ8 805 aa15.88■□□□□ 0.13
LIMS1-201ENST00000332345 NEK8Q86SG6 692 aa15.88■□□□□ 0.13
LIMS1-201ENST00000332345 PPP1R12CQ9BZL4 782 aa15.88■□□□□ 0.13
LIMS1-201ENST00000332345 ERAP1Q9NZ08 941 aa15.88■□□□□ 0.13
LIMS1-201ENST00000332345 TELO2Q9Y4R8 837 aa15.88■□□□□ 0.13
LIMS1-201ENST00000332345 BTBD18B2RXH4 712 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 DDX39AO00148 427 aaKnown RBP15.87■□□□□ 0.13
LIMS1-201ENST00000332345 CYP2C9P11712 490 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 GCFC2P16383 781 aaKnown RBP15.87■□□□□ 0.13
LIMS1-201ENST00000332345 CYP2C18P33260 490 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 FOSBP53539 338 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 KRT76Q01546 638 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 FPGSQ05932 587 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 BFSP2Q13515 415 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 HABP4Q5JVS0 413 aaKnown RBP15.87■□□□□ 0.13
LIMS1-201ENST00000332345 PPP4R3AQ6IN85 833 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 ZNF746Q6NUN9 644 aaPredicted RBP15.87■□□□□ 0.13
LIMS1-201ENST00000332345 PLPPR4Q7Z2D5 763 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 DIS3L2Q8IYB7 885 aaKnown RBP15.87■□□□□ 0.13
LIMS1-201ENST00000332345 CCDC155Q8N6L0 562 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 RETREG2Q8NC44 543 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 LENG9Q96B70 501 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 RIT2Q99578 217 aa15.87■□□□□ 0.13
LIMS1-201ENST00000332345 NOC4LQ9BVI4 516 aaKnown RBP15.87■□□□□ 0.13
LIMS1-201ENST00000332345 DDX25Q9UHL0 483 aaKnown RBP15.87■□□□□ 0.13
LIMS1-201ENST00000332345 TRIP12Q14669 1992 aaPredicted RBP15.86■□□□□ 0.13
LIMS1-201ENST00000332345 C17orf102A2RUQ5 167 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 MSH4O15457 936 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 CCNT1O60563 726 aaKnown RBP15.86■□□□□ 0.13
LIMS1-201ENST00000332345 LGR5O75473 907 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 CD2BP2O95400 341 aaKnown RBP15.86■□□□□ 0.13
LIMS1-201ENST00000332345 SMIM10L2AP0DMW4 78 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 SMIM10L2BP0DMW5 78 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 SLC26A2P50443 739 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 STAT5BP51692 787 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 NR5A1Q13285 461 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 PPIGQ13427 754 aaKnown RBP eCLIP15.86■□□□□ 0.13
LIMS1-201ENST00000332345 MIS18BP1Q6P0N0 1132 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 ABHD15Q6UXT9 468 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 TRIM50Q86XT4 487 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 SMAP1Q8IYB5 467 aaPredicted RBP15.86■□□□□ 0.13
LIMS1-201ENST00000332345 FBXO18Q8NFZ0 1043 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 MBOAT7Q96N66 472 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 UIMC1Q96RL1 719 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 RNPEPQ9H4A4 650 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.86■□□□□ 0.13
LIMS1-201ENST00000332345 EMSYQ7Z589 1322 aa15.86■□□□□ 0.13
LIMS1-201ENST00000332345 LTBP2Q14767 1821 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 BACH1O14867 736 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 MARCH6O60337 910 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 GAS7O60861 476 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 TDP2O95551 362 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 GUCY1B3Q02153 619 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 PTK7Q13308 1070 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 LRCH2Q5VUJ6 765 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 FAM160B1Q5W0V3 765 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 RPUSD2Q8IZ73 545 aaKnown RBP15.85■□□□□ 0.13
LIMS1-201ENST00000332345 TDHQ8IZJ6 230 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 CAGE1Q8TC20 777 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 SLC5A5Q92911 643 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 TNFRSF25Q93038 417 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 ATP6V0A1Q93050 837 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 TEKT3Q9BXF9 490 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 PCDH10Q9P2E7 1040 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 SAMM50Q9Y512 469 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 PCDHA10Q9Y5I2 948 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 NRCAMQ92823 1304 aa15.85■□□□□ 0.13
LIMS1-201ENST00000332345 RANBP2P49792 3224 aaKnown RBP15.85■□□□□ 0.13
LIMS1-201ENST00000332345 MYH9P35579 1960 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms