RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 DDX4Q9NQI0 724 aaKnown RBP16.93■□□□□ 0.3
BRCC3-201ENST00000330045 GOLGA6AQ9NYA3 693 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 SERPINB13Q9UIV8 391 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 KIAA1024Q9UPX6 916 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.93■□□□□ 0.3
BRCC3-201ENST00000330045 RGPD3A6NKT7 1758 aaPredicted RBP16.93■□□□□ 0.3
BRCC3-201ENST00000330045 RGPD4Q7Z3J3 1758 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 MYH7BA7E2Y1 1941 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 TRIM66O15016 1216 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 CFAP221Q4G0U5 840 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 C8orf74Q6P047 294 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.93■□□□□ 0.3
BRCC3-201ENST00000330045 ZFP91Q96JP5 570 aaPredicted RBP16.93■□□□□ 0.3
BRCC3-201ENST00000330045 RASSF4Q9H2L5 321 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 RNF14Q9UBS8 474 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 RSPH14Q9UHP6 348 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 PCDHA2Q9Y5H9 948 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 ADAMTSL1Q8N6G6 1762 aa16.93■□□□□ 0.3
BRCC3-201ENST00000330045 USP17L10C9JJH3 530 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 PPFIA4O75335 1185 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 PLA2G4BP0C869 781 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 MARSP56192 900 aaKnown RBP16.92■□□□□ 0.3
BRCC3-201ENST00000330045 GLE1Q53GS7 698 aaKnown RBP16.92■□□□□ 0.3
BRCC3-201ENST00000330045 HERC4Q5GLZ8 1057 aaPredicted RBP16.92■□□□□ 0.3
BRCC3-201ENST00000330045 EMBQ6PCB8 327 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 TMC4Q7Z404 712 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 TRIM59Q8IWR1 403 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 NAP1L4Q99733 375 aaKnown RBP16.92■□□□□ 0.3
BRCC3-201ENST00000330045 COA1Q9GZY4 146 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 RBM12Q9NTZ6 932 aaKnown RBP16.92■□□□□ 0.3
BRCC3-201ENST00000330045 SWAP70Q9UH65 585 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 SLURP2P0DP57 97 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
BRCC3-201ENST00000330045 KCTD1Q719H9 257 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 MS4A14Q96JA4 679 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 TRIM34Q9BYJ4 488 aa16.92■□□□□ 0.3
BRCC3-201ENST00000330045 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
BRCC3-201ENST00000330045 TNFRSF8P28908 595 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 NAB2Q15742 525 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 GPBP1Q86WP2 473 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 TBC1D5Q92609 795 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 UIMC1Q96RL1 719 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 KANSL2Q9H9L4 492 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 EMILIN3Q9NT22 766 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 ARFGEF1Q9Y6D6 1849 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 NPHP3-ACAD11A0A0J9YXS1 232 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 POTEB3A0JP26 581 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 POTECB2RU33 542 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 SHOX2O60902 331 aaPredicted RBP16.91■□□□□ 0.3
BRCC3-201ENST00000330045 PALMO75781 387 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
BRCC3-201ENST00000330045 SLC18A3Q16572 532 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 POTEBQ6S5H4 581 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 SCFD1Q8WVM8 642 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 CAVIN3Q969G5 261 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 KCTD10Q9H3F6 313 aa16.91■□□□□ 0.3
BRCC3-201ENST00000330045 MYO3BQ8WXR4 1341 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 GREB1LQ9C091 1923 aaPredicted RBP16.9■□□□□ 0.3
BRCC3-201ENST00000330045 GOLGA8KD6RF30 607 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 MPHOSPH10O00566 681 aaKnown RBP16.9■□□□□ 0.3
BRCC3-201ENST00000330045 OPA1O60313 960 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 SHMT1P34896 483 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 APBA1Q02410 837 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 ADAM9Q13443 819 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 RAPGEF1Q13905 1077 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 QSER1Q2KHR3 1735 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 SH3GL2Q99962 352 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.9■□□□□ 0.3
BRCC3-201ENST00000330045 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 CYP11B2P19099 503 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 KLRC1P26715 233 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 EPS15P42566 896 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 ALS2CLQ60I27 953 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 USP17L6PQ6QN14 398 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 TSEN2Q8NCE0 465 aaKnown RBP16.9■□□□□ 0.3
BRCC3-201ENST00000330045 PLEKHA4Q9H4M7 779 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 USP40Q9NVE5 1235 aa16.9■□□□□ 0.3
BRCC3-201ENST00000330045 ARID5AQ03989 594 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 KLHL30Q0D2K2 578 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 PPFIA1Q13136 1202 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 GLT8D2Q9H1C3 349 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 AIPL1Q9NZN9 384 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 SUGT1Q9Y2Z0 365 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 SCN9AQ15858 1988 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 A0A087X0T9 212 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 C21orf2O43822 256 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 HSF2BPO75031 334 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 FTCDO95954 541 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 KRT18P05783 430 aaKnown RBP16.89■□□□□ 0.29
BRCC3-201ENST00000330045 FAM228BP0C875 321 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 BAG6P46379 1132 aa16.89■□□□□ 0.29
BRCC3-201ENST00000330045 AOC3Q16853 763 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms