RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 IFNA8P32881 189 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 TAF1BQ53T94 588 aaPredicted RBP18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 BEND6Q5SZJ8 279 aaPredicted RBP18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 FAM133AQ8N9E0 248 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 NFU1Q9UMS0 254 aa18.16■□□□□ 0.5
SMCHD1-201ENST00000320876 A0A0G2JND7 137 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 KLRF2D3W0D1 207 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 CTSWP56202 376 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 ACAD11Q709F0 780 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 TJP3O95049 919 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 CAV1Q03135 178 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 RARS2Q5T160 578 aaKnown RBP18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 BZW1Q7L1Q6 419 aaKnown RBP18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 CMTR1Q8N1G2 835 aaKnown RBP18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 ZBTB18Q99592 522 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 WDR91A4D1P6 747 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 E2F6O75461 281 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 TBC1D1Q86TI0 1168 aaPredicted RBP18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 ANKRD13CQ8N6S4 541 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 CCNYQ8ND76 341 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 HSPD1P10809 573 aaKnown RBP18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 DPP8Q6V1X1 898 aaPredicted RBP18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 MTBPQ96DY7 904 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 SLC12A6Q9UHW9 1150 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 STRIP2Q9ULQ0 834 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 ENAHQ8N8S7 591 aaPredicted RBP18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 SPDYE1Q8NFV5 336 aaPredicted RBP18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 KDM1AO60341 852 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 CATSPER1Q8NEC5 780 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 LAMC1P11047 1609 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 CFAP73A6NFT4 308 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 SLFNL1Q499Z3 407 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 IFNL3Q8IZI9 196 aa18.15■□□□□ 0.5
SMCHD1-201ENST00000320876 HSPA4LO95757 839 aa18.14■□□□□ 0.5
SMCHD1-201ENST00000320876 WDR75Q8IWA0 830 aaKnown RBP18.14■□□□□ 0.5
SMCHD1-201ENST00000320876 ATP8B3O60423 1300 aa18.14■□□□□ 0.5
SMCHD1-201ENST00000320876 XPAP23025 273 aaPredicted RBP18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 ACRBPQ8NEB7 543 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 SUFUQ9UMX1 484 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 POTEB3A0JP26 581 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 XPOTO43592 962 aaKnown RBP18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 DYNLT1P63172 113 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 TNFAIP1Q13829 316 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 POTEBQ6S5H4 581 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 ANGPTL8Q6UXH0 198 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 SMYD3Q9H7B4 428 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 AS3MTQ9HBK9 375 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 POLR1AO95602 1720 aaPredicted RBP18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 PPP1R12AO14974 1030 aaPredicted RBP18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 PKP1Q13835 747 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 PPP4R3CPQ6ZMV5 832 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 SPTLC3Q9NUV7 552 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 ABCC4O15439 1325 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 KRT8P05787 483 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 RNF169Q8NCN4 708 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 STX18Q9P2W9 335 aaKnown RBP18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 DAB2P98082 770 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 EXOC8Q8IYI6 725 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 SUPT20HQ8NEM7 779 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 SLC52A2Q9HAB3 445 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 GJA3Q9Y6H8 435 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 PRPSAP2O60256 369 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 ZBED6P86452 979 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 TMPRSS15P98073 1019 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 CALN1Q9BXU9 219 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 TNKSO95271 1327 aa18.14■□□□□ 0.49
SMCHD1-201ENST00000320876 OR9Q1Q8NGQ5 310 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 COPG1Q9Y678 874 aaKnown RBP18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 HNRNPCP07910 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 DACH2Q96NX9 599 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 TMEM206Q9H813 350 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 ABCB6Q9NP58 842 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 ARHGAP26Q9UNA1 814 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 RASA4BC9J798 803 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 RASA4O43374 803 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 ZBTB41Q5SVQ8 909 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 COG4Q9H9E3 785 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 RASSF10A6NK89 507 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 CCDC188H7C350 402 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 EFCAB14O75071 495 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 CAPRIN2Q6IMN6 1127 aaKnown RBP18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 TTLL11Q8NHH1 800 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 ADAM21Q9UKJ8 722 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 CDV3Q9UKY7 258 aaKnown RBP18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 PCDHA4Q9UN74 947 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 LRRC8BQ6P9F7 803 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 ANO5Q75V66 913 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 PARP9Q8IXQ6 854 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 FMNL1O95466 1100 aaPredicted RBP18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 FTCDO95954 541 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 FRA10AC1Q70Z53 315 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 SMCR8Q8TEV9 937 aaPredicted RBP18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 NEURL1BA8MQ27 555 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 APOA1P02647 267 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 PDIA3P30101 505 aaKnown RBP18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 C11orf57Q6ZUT1 292 aaPredicted RBP18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 ARMC2Q8NEN0 867 aa18.13■□□□□ 0.49
SMCHD1-201ENST00000320876 PPARGC1AQ9UBK2 798 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms