RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 NR2E1Q9Y466 385 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 PLCH1Q4KWH8 1693 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 GOLGA8AA7E2F4 631 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 USP17L12C9JPN9 530 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 USP17L21D6R901 530 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 SPECC1L-ADORA2AF8WAN1 911 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 EVCP57679 992 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 MDM2Q00987 491 aaPredicted RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 SP4Q02446 784 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 TMEM67Q5HYA8 995 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 FAM196AQ6ZSG2 479 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 NYAP1Q6ZVC0 841 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 APTXQ7Z2E3 356 aaKnown RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 MAATS1Q7Z4T9 603 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 TRAIPQ9BWF2 469 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 SH3BP1Q9Y3L3 701 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 ABCC12Q96J65 1359 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 TJP1Q07157 1748 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 PSDA5PKW4 1024 aaPredicted RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 ZEB2O60315 1214 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 NRLP54845 237 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 GNG11P61952 73 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 LAMB3Q13751 1172 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 TMTC2Q8N394 836 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 ZNF280CQ8ND82 737 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 GOLGA1Q92805 767 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 PLCB1Q9NQ66 1216 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 HELLSQ9NRZ9 838 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.96□□□□□ -1.786e-7■■■■□ 21.1
GEN1-201ENST00000317402 CEP126Q9P2H0 1117 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 ANKRD62A6NC57 917 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 ENO4A6NNW6 628 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 H7C1W4 665 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 COG7P83436 770 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 STXBP4Q6ZWJ1 553 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 CCDC12Q8WUD4 166 aaPredicted RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 ARL8AQ96BM9 186 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 SPDL1Q96EA4 605 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 VCX3BQ9H321 246 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 VCX3AQ9NNX9 186 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 EXOC1Q9NV70 894 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 GUCA1BQ9UMX6 200 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 MAFGO15525 162 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 OPA1O60313 960 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 HSF2BPO75031 334 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 CSDE1O75534 798 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 GDF11O95390 407 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 FTCDO95954 541 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 SEC24CP53992 1094 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 IFIT5Q13325 482 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 EPC2Q52LR7 807 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 CAPRIN2Q6IMN6 1127 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 CCDC174Q6PII3 467 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 PNPLA1Q8N8W4 532 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 NSRP1Q9H0G5 558 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 NEUROG2Q9H2A3 272 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 KIF9Q9HAQ2 790 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 TRIM33Q9UPN9 1127 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 DDX60Q8IY21 1712 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 PTPRBP23467 1997 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 GSG1L2A8MUP6 293 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 B4DLN1 442 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 SNUPNO95149 360 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 MRPL12P52815 198 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 ACTN3Q08043 901 aaPredicted RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 IKQ13123 557 aaPredicted RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 RRP1BQ14684 758 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 E2F5Q15329 346 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 QPCTQ16769 361 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 HSP90AA5PQ58FG0 334 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 ZNF280DQ6N043 979 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 LINS1Q8NG48 757 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 PLBD2Q8NHP8 589 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 FAM200AQ8TCP9 573 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 ZC3H15Q8WU90 426 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 SYMPKQ92797 1274 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 BICD1Q96G01 975 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 LY9Q9HBG7 655 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 PPP2R2CQ9Y2T4 447 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 IKBKGQ9Y6K9 419 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 F5H423 210 aaPredicted RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 RNF113AO15541 343 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 NOL3O60936 208 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 PPFIA2O75334 1257 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 GLRX3O76003 335 aaKnown RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 GFAPP14136 432 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 GJA8P48165 433 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 GUCY2FP51841 1108 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 DMPKQ09013 629 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 SMARCC2Q8TAQ2 1214 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 CXorf38Q8TB03 319 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 ACSF2Q96CM8 615 aaPredicted RBP3.95□□□□□ -1.78
GEN1-201ENST00000317402 TMEM165Q9HC07 324 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 GNPTABQ3T906 1256 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 USH1GQ495M9 461 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 CCDC158Q5M9N0 1113 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 C6orf163Q5TEZ5 329 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 GRAMD4Q6IC98 578 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 KANK3Q6NY19 840 aa3.95□□□□□ -1.78
GEN1-201ENST00000317402 TSC22D4Q9Y3Q8 395 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms