RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 CCDC170Q8IYT3 715 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 ARL8AQ96BM9 186 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 CEP89Q96ST8 783 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 RUFY1Q96T51 708 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 SH3GL2Q99962 352 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 CNOT7Q9UIV1 285 aaKnown RBP18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 FZD1Q9UP38 647 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 RASSF10A6NK89 507 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 USP17L15C9J2P7 530 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 USP17L13C9JLJ4 530 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 USP17L11C9JVI0 530 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 USP17L18D6R9N7 530 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 USP17L22D6RA61 530 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 USP17L17D6RBQ6 530 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 USP17L19D6RCP7 530 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 USP17L20D6RJB6 530 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 VAV2P52735 878 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 USP17L24Q0WX57 530 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 GALNT17Q6IS24 598 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 USP17L6PQ6QN14 398 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 TSEN2Q8NCE0 465 aaKnown RBP18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 RASSF8Q8NHQ8 419 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 PSMB7Q99436 277 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 TUBGCP2Q9BSJ2 902 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 CAPN6Q9Y6Q1 641 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 PSME4Q14997 1843 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 GREB1LQ9C091 1923 aaPredicted RBP18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 ADCY7P51828 1080 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 TBC1D8BQ0IIM8 1120 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 USH1GQ495M9 461 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 TTMPQ5BVD1 217 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 FKBP15Q5T1M5 1219 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 KCNV1Q6PIU1 500 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 MTMR14Q8NCE2 650 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 SPATA4Q8NEY3 305 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 ZNF541Q9H0D2 1346 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 SMARCAL1Q9NZC9 954 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 PGAP2Q9UHJ9 254 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 PSMA7O14818 248 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 EDIL3O43854 480 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 ZBED6P86452 979 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 PDCLQ13371 301 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 CDC37Q16543 378 aaPredicted RBP18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 PCDHA1Q9Y5I3 950 aa18.96■□□□□ 0.63
SCAMP4-201ENST00000316097 ZNF263O14978 683 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 TNNI2P48788 182 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 TRIM58Q8NG06 486 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 GJA10Q969M2 543 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 MLXIPQ9HAP2 919 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 ZBTB21Q9ULJ3 1066 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 FER1L6Q2WGJ9 1857 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 NDUFAB1O14561 156 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 PLEKP08567 350 aaPredicted RBP18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 EPHB4P54760 987 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 DGKZQ13574 1117 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 SPA17Q15506 151 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 ARHGAP27Q6ZUM4 889 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 KRT25Q7Z3Z0 450 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 CCDC91Q7Z6B0 441 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 DCAF4Q8WV16 495 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 CCDC42Q96M95 316 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 NUP58Q9BVL2 599 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 TSGA10Q9BZW7 698 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 EHD2Q9NZN4 543 aa18.95■□□□□ 0.62
SCAMP4-201ENST00000316097 HSF2BPO75031 334 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 TACC1O75410 805 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 CXCR5P32302 372 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 TTI2Q6NXR4 508 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 CSGALNACT2Q8N6G5 542 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 DISC1Q9NRI5 854 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 MOCS3O95396 460 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 TDP2O95551 362 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 BMP3P12645 472 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 LONP1P36776 959 aaKnown RBP18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 ATP1A2P50993 1020 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 NFRKBQ6P4R8 1299 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 NEK8Q86SG6 692 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 SH2D3CQ8N5H7 860 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 MTMR8Q96EF0 704 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 PSTPIP2Q9H939 334 aa18.94■□□□□ 0.62
SCAMP4-201ENST00000316097 BRCA1P38398 1863 aaKnown RBP18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 FZD9O00144 591 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 FAM83BQ5T0W9 1011 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 KCTD16Q68DU8 428 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 DTHD1Q6ZMT9 781 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 POLD4Q9HCU8 107 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 HACL1Q9UJ83 578 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 CAPN7Q9Y6W3 813 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 USO1O60763 962 aaKnown RBP18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 NAALADL2Q58DX5 795 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 CCDC181Q5TID7 509 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 FAM83AQ86UY5 434 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 RETREG2Q8NC44 543 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 GMCL1P1Q8NEA9 526 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 OSBPL9Q96SU4 736 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 STIM2Q9P246 746 aa18.93■□□□□ 0.62
SCAMP4-201ENST00000316097 SLC37A4O43826 429 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 KLRC4O43908 158 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 EPB41P11171 864 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms