RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 HESX1Q9UBX0 185 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 NFU1Q9UMS0 254 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 CAMSAP1Q5T5Y3 1602 aa14.95□□□□□ -0.02
SPAST-201ENST00000315285 POC1B-GALNT4F8VUJ3 575 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 NR1D1P20393 614 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 ATP2C1P98194 919 aaPredicted RBP14.94□□□□□ -0.02
SPAST-201ENST00000315285 AP3B2Q13367 1082 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 SNX1Q13596 522 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 CTTNQ14247 550 aaKnown RBP14.94□□□□□ -0.02
SPAST-201ENST00000315285 LRRC8CQ8TDW0 803 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 CEP170P1Q96L14 293 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 ADPGKQ9BRR6 497 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 ADAM21Q9UKJ8 722 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 TTC26A0AVF1 554 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 LRRC53A6NM62 1247 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 CTNND1O60716 968 aaKnown RBP14.94□□□□□ -0.02
SPAST-201ENST00000315285 GYS2P54840 703 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 MRPS25P82663 173 aaKnown RBP14.94□□□□□ -0.02
SPAST-201ENST00000315285 FBXO2Q9UK22 296 aaPredicted RBP14.94□□□□□ -0.02
SPAST-201ENST00000315285 COL15A1P39059 1388 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 ZBTB5O15062 677 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 GMNNO75496 209 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 FOXP4Q8IVH2 680 aaPredicted RBP14.94□□□□□ -0.02
SPAST-201ENST00000315285 KSR1Q8IVT5 923 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 DPF2Q92785 391 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.94□□□□□ -0.02
SPAST-201ENST00000315285 CPS1P31327 1500 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 FMO2Q99518 471 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 NARFQ9UHQ1 456 aa14.94□□□□□ -0.02
SPAST-201ENST00000315285 PP2D1A8MPX8 630 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 VGLL3A8MV65 326 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 IL9RQ01113 521 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 FAM81BQ96LP2 452 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 SPZ1Q9BXG8 430 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 BARHL2Q9NY43 387 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 TNS3Q68CZ2 1445 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 FAM160B1Q5W0V3 765 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 TRIM50Q86XT4 487 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.93□□□□□ -0.02
SPAST-201ENST00000315285 NEK9Q8TD19 979 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 RAD54LQ92698 747 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 PLA2G12BQ9BX93 195 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 NOL3O60936 208 aaKnown RBP14.93□□□□□ -0.02
SPAST-201ENST00000315285 PALMO75781 387 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 SLC8A1P32418 973 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 CEP95Q96GE4 821 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 TAF6LQ9Y6J9 622 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 ORC4O43929 436 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 DR1Q01658 176 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 CUL1Q13616 776 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 GLE1Q53GS7 698 aaKnown RBP14.93□□□□□ -0.02
SPAST-201ENST00000315285 TMEM179Q6ZVK1 233 aa14.93□□□□□ -0.02
SPAST-201ENST00000315285 TRPC5Q9UL62 973 aaPredicted RBP14.93□□□□□ -0.02
SPAST-201ENST00000315285 A0A087WUV0 522 aaPredicted RBP14.92□□□□□ -0.02
SPAST-201ENST00000315285 CCDC188H7C350 402 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 VCXQ9H320 206 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.92□□□□□ -0.02
SPAST-201ENST00000315285 NOVA2Q9UNW9 492 aaKnown RBP14.92□□□□□ -0.02
SPAST-201ENST00000315285 NEXMIFQ5QGS0 1516 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 ZNF335Q9H4Z2 1342 aaPredicted RBP14.92□□□□□ -0.02
SPAST-201ENST00000315285 SFI1A8K8P3 1242 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 SGK1O00141 431 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 HNRNPH2P55795 449 aaKnown RBP14.92□□□□□ -0.02
SPAST-201ENST00000315285 SNAP25P60880 206 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 CCZ1BP86790 482 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 CCZ1P86791 482 aaPredicted RBP14.92□□□□□ -0.02
SPAST-201ENST00000315285 TTBK2Q6IQ55 1244 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 CYP4F22Q6NT55 531 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 PHLDB2Q86SQ0 1253 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 NCAPG2Q86XI2 1143 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 PLCD3Q8N3E9 789 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 MXD3Q9BW11 206 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 CD209Q9NNX6 404 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 BCS1LQ9Y276 419 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 UTYO14607 1347 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 SLC12A2P55011 1212 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 YWHAGP61981 247 aaKnown RBP eCLIP14.92□□□□□ -0.02
SPAST-201ENST00000315285 ORC2Q13416 577 aaPredicted RBP14.92□□□□□ -0.02
SPAST-201ENST00000315285 SLMAPQ14BN4 828 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 PPP4R1Q8TF05 950 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 CNOT10Q9H9A5 744 aaKnown RBP14.92□□□□□ -0.02
SPAST-201ENST00000315285 H7C0C1 242 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 GIPC1O14908 333 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 SLCO1A2P46721 670 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 ATP5OP48047 213 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 PPM1FP49593 454 aaPredicted RBP14.92□□□□□ -0.02
SPAST-201ENST00000315285 ARMC9Q7Z3E5 817 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 EPC1Q9H2F5 836 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 ANAPC5Q9UJX4 755 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.92□□□□□ -0.02
SPAST-201ENST00000315285 MRFAP1Q9Y605 127 aa14.92□□□□□ -0.02
SPAST-201ENST00000315285 E9PMD0 336 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 FGGP02679 453 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 ZKSCAN8Q15776 578 aaPredicted RBP14.91□□□□□ -0.02
SPAST-201ENST00000315285 SNCBQ16143 134 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 SFR1Q86XK3 245 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 MAP7D3Q8IWC1 876 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 CCDC117Q8IWD4 279 aaPredicted RBP14.91□□□□□ -0.02
SPAST-201ENST00000315285 IGDCC4Q8TDY8 1250 aa14.91□□□□□ -0.02
SPAST-201ENST00000315285 HMGB1P1B2RPK0 211 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms