RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 KIF11P52732 1056 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 C2orf54Q08AI8 447 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 RCN2Q14257 317 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 CYB5R4Q7L1T6 521 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 HADHAP40939 763 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 IWS1Q96ST2 819 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 HEMGNQ9BXL5 484 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 ZNF302Q9NR11 478 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 FAM217BQ9NTX9 383 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-201ENST00000303354 KRT71Q3SY84 523 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 HDXQ7Z353 690 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 SYCE1Q8N0S2 351 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 GNA14O95837 355 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 GRIK1P39086 918 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 SLCO1A2P46721 670 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 RBL2Q08999 1139 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 CFAP221Q4G0U5 840 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 LGSNQ5TDP6 509 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 CEP95Q96GE4 821 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 MRPL42Q9Y6G3 142 aaKnown RBP8.45□□□□□ -1.06
SCN9A-201ENST00000303354 KBTBD13C9JR72 458 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 NEDD4P46934 1319 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 AP1M1Q9BXS5 423 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 ATP5DP30049 168 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 VCPP55072 806 aaKnown RBP8.45□□□□□ -1.06
SCN9A-201ENST00000303354 MYO1EQ12965 1108 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 ZNF274Q96GC6 653 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-201ENST00000303354 RIC8AQ9NPQ8 531 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 BSDC1Q9NW68 430 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-201ENST00000303354 HEY1Q9Y5J3 304 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 HOXB7P09629 217 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 ERCC6LQ2NKX8 1250 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 HS1BP3Q53T59 392 aa8.45□□□□□ -1.06
SCN9A-201ENST00000303354 CCDC94Q9BW85 323 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-201ENST00000303354 PIN4Q9Y237 131 aaKnown RBP8.45□□□□□ -1.06
SCN9A-201ENST00000303354 AFPP02771 609 aaKnown RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 PLCG1P19174 1290 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 STX2P32856 288 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 CTNNA1P35221 906 aaKnown RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 GPATCH4Q5T3I0 446 aaKnown RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 KCTD16Q68DU8 428 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 PNMA8AQ86V59 439 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 RNF135Q8IUD6 432 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 AFAP1L1Q8TED9 768 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 SPTLC3Q9NUV7 552 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 PCSK1NQ9UHG2 260 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 KCNH4Q9UQ05 1017 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 ITSN2Q9NZM3 1697 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 RARBP10826 455 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 IFNAR2P48551 515 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 RC3H1Q5TC82 1133 aaKnown RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 BBS5Q8N3I7 341 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 HYOU1Q9Y4L1 999 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 COL15A1P39059 1388 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 PSMD14O00487 310 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 KCNA1Q09470 495 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 TRIM14Q14142 442 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 INTS4Q96HW7 963 aaKnown RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 FBXL5Q9UKA1 691 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 SP100P23497 879 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 CDR2LQ86X02 465 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 FGD4Q96M96 766 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 NUF2Q9BZD4 464 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 IGFLR1Q9H665 355 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 NRBP1Q9UHY1 535 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 FAM47DPA6NHR8 397 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 MYO1FO00160 1098 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 ARL4AP40617 200 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 KCNJ6P48051 423 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 ZMYM1Q5SVZ6 1142 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 PDZD4Q76G19 769 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 ZKSCAN4Q969J2 545 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 EMILIN3Q9NT22 766 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 CFAP69A5D8W1 941 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 UBE3CQ15386 1083 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 SSH3Q8TE77 659 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 ATP2A3Q93084 1043 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 IPO11Q9UI26 975 aaKnown RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 ZKSCAN5Q9Y2L8 839 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 CCDC85CA6NKD9 419 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 CHGBP05060 677 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 EEF1GP26641 437 aaKnown RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 CASP14P31944 242 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 SLC7A5Q01650 507 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 C10orf76Q5T2E6 689 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 CCDC62Q6P9F0 684 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 ZNF507Q8TCN5 953 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 DEPDC1BQ8WUY9 529 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 DDHD2O94830 711 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 SYF2O95926 243 aaKnown RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 POLR2BP30876 1174 aaKnown RBP8.44□□□□□ -1.06
SCN9A-201ENST00000303354 TMED2Q15363 201 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 IFT43Q96FT9 208 aa8.44□□□□□ -1.06
SCN9A-201ENST00000303354 RNF123Q5XPI4 1314 aa8.43□□□□□ -1.06
SCN9A-201ENST00000303354 PFKFB2O60825 505 aa8.43□□□□□ -1.06
SCN9A-201ENST00000303354 PPFIA2O75334 1257 aa8.43□□□□□ -1.06
SCN9A-201ENST00000303354 CYP2E1P05181 493 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms