RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 CFBP00751 764 aa17.16■□□□□ 0.34
UBXN1-202ENST00000301935 SUPT20HL2P0C7V6 817 aa17.16■□□□□ 0.34
UBXN1-202ENST00000301935 NR5A1Q13285 461 aa17.16■□□□□ 0.34
UBXN1-202ENST00000301935 OXER1Q8TDS5 423 aa17.16■□□□□ 0.34
UBXN1-202ENST00000301935 PCDHA11Q9Y5I1 949 aa17.16■□□□□ 0.34
UBXN1-202ENST00000301935 MYO9BQ13459 2157 aa17.16■□□□□ 0.34
UBXN1-202ENST00000301935 OPLAHO14841 1288 aa17.15■□□□□ 0.34
UBXN1-202ENST00000301935 MYL3P08590 195 aa17.15■□□□□ 0.34
UBXN1-202ENST00000301935 CYP2C9P11712 490 aa17.15■□□□□ 0.34
UBXN1-202ENST00000301935 MYOGP15173 224 aa17.15■□□□□ 0.34
UBXN1-202ENST00000301935 ORC2Q13416 577 aaPredicted RBP17.15■□□□□ 0.34
UBXN1-202ENST00000301935 FOXD4L5Q5VV16 416 aaPredicted RBP17.15■□□□□ 0.34
UBXN1-202ENST00000301935 MYSM1Q5VVJ2 828 aa17.15■□□□□ 0.34
UBXN1-202ENST00000301935 RNF207Q6ZRF8 634 aa17.15■□□□□ 0.34
UBXN1-202ENST00000301935 OR6J1Q8NGC5 347 aa17.15■□□□□ 0.34
UBXN1-202ENST00000301935 ADAMTS19Q8TE59 1207 aa17.15■□□□□ 0.34
UBXN1-202ENST00000301935 FOXD4L4Q8WXT5 416 aaPredicted RBP17.15■□□□□ 0.34
UBXN1-202ENST00000301935 TNPO1Q92973 898 aaKnown RBP17.15■□□□□ 0.34
UBXN1-202ENST00000301935 GBP4Q96PP9 640 aa17.15■□□□□ 0.34
UBXN1-202ENST00000301935 MTG1Q9BT17 334 aaPredicted RBP17.15■□□□□ 0.34
UBXN1-202ENST00000301935 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
UBXN1-202ENST00000301935 BMP15O95972 392 aa17.14■□□□□ 0.33
UBXN1-202ENST00000301935 ATP2A2P16615 1042 aaKnown RBP17.14■□□□□ 0.33
UBXN1-202ENST00000301935 USP11P51784 963 aa17.14■□□□□ 0.33
UBXN1-202ENST00000301935 KRT85P78386 507 aa17.14■□□□□ 0.33
UBXN1-202ENST00000301935 MRPS5P82675 430 aaKnown RBP17.14■□□□□ 0.33
UBXN1-202ENST00000301935 TTLL4Q14679 1199 aa17.14■□□□□ 0.33
UBXN1-202ENST00000301935 CSPP1Q1MSJ5 1256 aa17.14■□□□□ 0.33
UBXN1-202ENST00000301935 JAKMIP3Q5VZ66 844 aa17.14■□□□□ 0.33
UBXN1-202ENST00000301935 USP17L6PQ6QN14 398 aa17.14■□□□□ 0.33
UBXN1-202ENST00000301935 PIK3AP1Q6ZUJ8 805 aa17.14■□□□□ 0.33
UBXN1-202ENST00000301935 CEP131Q9UPN4 1083 aa17.14■□□□□ 0.33
UBXN1-202ENST00000301935 B4DLN1 442 aa17.13■□□□□ 0.33
UBXN1-202ENST00000301935 NKRFO15226 690 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBXN1-202ENST00000301935 EDNRBP24530 442 aa17.13■□□□□ 0.33
UBXN1-202ENST00000301935 RPS6P62753 249 aaKnown RBP17.13■□□□□ 0.33
UBXN1-202ENST00000301935 PDE4DQ08499 809 aa17.13■□□□□ 0.33
UBXN1-202ENST00000301935 UBE2SQ16763 222 aa17.13■□□□□ 0.33
UBXN1-202ENST00000301935 BRDTQ58F21 947 aaPredicted RBP17.13■□□□□ 0.33
UBXN1-202ENST00000301935 XRRA1Q6P2D8 792 aa17.13■□□□□ 0.33
UBXN1-202ENST00000301935 MPHOSPH6Q99547 160 aaKnown RBP17.13■□□□□ 0.33
UBXN1-202ENST00000301935 SCAND2PQ9GZW5 306 aaPredicted RBP17.13■□□□□ 0.33
UBXN1-202ENST00000301935 PTPRSQ13332 1948 aa17.12■□□□□ 0.33
UBXN1-202ENST00000301935 GCFC2P16383 781 aaKnown RBP17.12■□□□□ 0.33
UBXN1-202ENST00000301935 RFC2P35250 354 aa17.12■□□□□ 0.33
UBXN1-202ENST00000301935 FAM47CQ5HY64 1035 aa17.12■□□□□ 0.33
UBXN1-202ENST00000301935 MOXD1Q6UVY6 613 aa17.12■□□□□ 0.33
UBXN1-202ENST00000301935 DEFB128Q7Z7B8 93 aa17.12■□□□□ 0.33
UBXN1-202ENST00000301935 NEK8Q86SG6 692 aa17.12■□□□□ 0.33
UBXN1-202ENST00000301935 DNERQ8NFT8 737 aa17.12■□□□□ 0.33
UBXN1-202ENST00000301935 SCFD2Q8WU76 684 aa17.12■□□□□ 0.33
UBXN1-202ENST00000301935 UHRF1Q96T88 793 aaPredicted RBP17.12■□□□□ 0.33
UBXN1-202ENST00000301935 ANO3Q9BYT9 981 aa17.12■□□□□ 0.33
UBXN1-202ENST00000301935 COL4A4P53420 1690 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-202ENST00000301935 A6NJR5 290 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 GOLGA6L22H0YM25 854 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 CA3P07451 260 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 CYP3A4P08684 503 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 ACTN1P12814 892 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 COL9A1P20849 921 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 HOXA13P31271 388 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-202ENST00000301935 SREBF1P36956 1147 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 NBPF20Q3BBV1 942 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 NFRKBQ6P4R8 1299 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 MICALL1Q8N3F8 863 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 RASGRP4Q8TDF6 673 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 SYTL5Q8TDW5 730 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-202ENST00000301935 TBCKQ8TEA7 893 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 SLC9A7Q96T83 725 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 TSPYL2Q9H2G4 693 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-202ENST00000301935 RTEL1Q9NZ71 1219 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 MORC2Q9Y6X9 1032 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-202ENST00000301935 TRANK1O15050 2925 aa17.11■□□□□ 0.33
UBXN1-202ENST00000301935 KIAA1217Q5T5P2 1943 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 KPNA6O60684 536 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 BAG4O95429 457 aaKnown RBP17.1■□□□□ 0.33
UBXN1-202ENST00000301935 YEATS4O95619 227 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 PTPN11Q06124 597 aaPredicted RBP17.1■□□□□ 0.33
UBXN1-202ENST00000301935 INF2Q27J81 1249 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 TTC38Q5R3I4 469 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 PPP4R3AQ6IN85 833 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 FCHSD1Q86WN1 690 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 NSUN6Q8TEA1 469 aaKnown RBP17.1■□□□□ 0.33
UBXN1-202ENST00000301935 PPP1R13LQ8WUF5 828 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 TBC1D5Q92609 795 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 COPS5Q92905 334 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 IWS1Q96ST2 819 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 TMEM260Q9NX78 707 aa17.1■□□□□ 0.33
UBXN1-202ENST00000301935 LAD1O00515 517 aa17.09■□□□□ 0.33
UBXN1-202ENST00000301935 ARIH2O95376 493 aa17.09■□□□□ 0.33
UBXN1-202ENST00000301935 IQCF3P0C7M6 154 aa17.09■□□□□ 0.33
UBXN1-202ENST00000301935 TXNP10599 105 aaKnown RBP17.09■□□□□ 0.33
UBXN1-202ENST00000301935 NASPP49321 788 aaPredicted RBP17.09■□□□□ 0.33
UBXN1-202ENST00000301935 ARHGAP4P98171 946 aa17.09■□□□□ 0.33
UBXN1-202ENST00000301935 DNM1Q05193 864 aaKnown RBP17.09■□□□□ 0.33
UBXN1-202ENST00000301935 EARS2Q5JPH6 523 aaKnown RBP17.09■□□□□ 0.33
UBXN1-202ENST00000301935 RMDN3Q96TC7 470 aa17.09■□□□□ 0.33
UBXN1-202ENST00000301935 FRMPD4Q14CM0 1322 aa17.09■□□□□ 0.33
UBXN1-202ENST00000301935 TCF20Q9UGU0 1960 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms