RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 KRT2P35908 639 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 PSMC4P43686 418 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 OAZ1P54368 228 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 RPS6P62753 249 aaKnown RBP7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 MAP2K1Q02750 393 aaPredicted RBP7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 PRKCZQ05513 592 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 INF2Q27J81 1249 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 LARP1BQ659C4 914 aaKnown RBP7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 RNF207Q6ZRF8 634 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 PIK3AP1Q6ZUJ8 805 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 BLIDQ8IZY5 108 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 MB21D1Q8N884 522 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 CCDC148Q8NFR7 591 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 ZNF296Q8WUU4 475 aaPredicted RBP7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 GJA10Q969M2 543 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 LENG1Q96BZ8 264 aaPredicted RBP7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 INTS4Q96HW7 963 aaKnown RBP7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 ZCCHC17Q9NP64 241 aaKnown RBP7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 RIC8AQ9NPQ8 531 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 CYP39A1Q9NYL5 469 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 FLRT1Q9NZU1 646 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 PCDHA6Q9UN73 950 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 PCDHA4Q9UN74 947 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 MRPL11Q9Y3B7 192 aaKnown RBP7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 PCDHA8Q9Y5H6 950 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 ESYT2A0FGR8 921 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 GCOM1H8Y6P7 765 aaPredicted RBP7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 M0R2N6 131 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 DLL1O00548 723 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 STX6O43752 255 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 TDP2O95551 362 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 POLR2MP0CAP2 368 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 HSD17B4P51659 736 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 LACTBP83111 547 aaPredicted RBP7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 TRIM29Q14134 588 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 PPP2R5BQ15173 497 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 TMEM63BQ5T3F8 832 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 EEPD1Q7L9B9 569 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 PLEKHH3Q7Z736 793 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 FBXO16Q8IX29 292 aaPredicted RBP7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 REXO1Q8N1G1 1221 aaKnown RBP7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 ANKRD35Q8N283 1001 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 DAGLBQ8NCG7 672 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 FBXO18Q8NFZ0 1043 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 GTF3C2Q8WUA4 911 aaPredicted RBP7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 CUL5Q93034 780 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 ZMYND12Q9H0C1 365 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 PSTPIP2Q9H939 334 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 C6orf50Q9HD87 102 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 POLMQ9NP87 494 aaPredicted RBP7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 TELO2Q9Y4R8 837 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 RPTORQ8N122 1335 aa7.42□□□□□ -1.22
DEPDC4-201ENST00000299185 MYH15Q9Y2K3 1946 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 MCM3APO60318 1980 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 hCG_1984214I3L0E3 225 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 FKTNO75072 461 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 BRD1O95696 1058 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 F13A1P00488 732 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 MYCP01106 439 aaPredicted RBP7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 MYCLP12524 364 aaPredicted RBP7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 ELNP15502 786 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 CLK2P49760 499 aaKnown RBP7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 ALDH5A1P51649 535 aaPredicted RBP7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 FCGRTP55899 365 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 INHBEP58166 350 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 CCNA1P78396 465 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 SP3Q02447 781 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 CEBPZQ03701 1054 aaKnown RBP7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 GRB14Q14449 540 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 KCTD2Q14681 263 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 TKFCQ3LXA3 575 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 GJC2Q5T442 439 aaPredicted RBP7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 FOXR1Q6PIV2 292 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 CCAR1Q8IX12 1150 aaKnown RBP7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 ZNF713Q8N859 430 aaPredicted RBP7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 FAM133AQ8N9E0 248 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 SHCBP1Q8NEM2 672 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 CHST13Q8NET6 341 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 WASF1Q92558 559 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 INSM2Q96T92 566 aaPredicted RBP7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 KRTAP4-8Q9BYQ9 185 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 GDPD2Q9HCC8 539 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 PTCH2Q9Y6C5 1203 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 PLXNA1Q9UIW2 1896 aa7.41□□□□□ -1.22
DEPDC4-201ENST00000299185 MYH7BA7E2Y1 1941 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 DNAJC25-GNG10A0A024R161 153 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 CCDC194A0A1B0GVG4 234 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 SLC15A5A6NIM6 579 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 SLC37A4O43826 429 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 SLC25A27O95847 323 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 PROCP04070 461 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 ZSCAN22P10073 491 aaPredicted RBP7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 FCER1AP12319 257 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 MAPK4P31152 587 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 CYP2C19P33261 490 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 FLT3LGP49771 235 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 TOB1P50616 345 aaPredicted RBP7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 ARHGAP4P98171 946 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 RELBQ01201 579 aa7.4□□□□□ -1.22
DEPDC4-201ENST00000299185 GNL2Q13823 731 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms