RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 CIITAP33076 1130 aa13.71□□□□□ -0.21
HMGB2-201ENST00000296503 BMP8BP34820 402 aa13.71□□□□□ -0.21
HMGB2-201ENST00000296503 PTGISQ16647 500 aa13.71□□□□□ -0.21
HMGB2-201ENST00000296503 FAM184AQ8NB25 1140 aa13.71□□□□□ -0.21
HMGB2-201ENST00000296503 OXER1Q8TDS5 423 aa13.71□□□□□ -0.21
HMGB2-201ENST00000296503 NFASCO94856 1347 aa13.71□□□□□ -0.21
HMGB2-201ENST00000296503 SCN10AQ9Y5Y9 1956 aa13.71□□□□□ -0.22
HMGB2-201ENST00000296503 HAS3O00219 553 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 IPO5O00410 1097 aaKnown RBP13.7□□□□□ -0.22
HMGB2-201ENST00000296503 KRT2P35908 639 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 SETQ01105 290 aaPredicted RBP13.7□□□□□ -0.22
HMGB2-201ENST00000296503 ITGB3BPQ13352 177 aaPredicted RBP13.7□□□□□ -0.22
HMGB2-201ENST00000296503 INF2Q27J81 1249 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 HABP4Q5JVS0 413 aaKnown RBP13.7□□□□□ -0.22
HMGB2-201ENST00000296503 GLG1Q92896 1179 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 HIPK3Q9H422 1215 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 ZNF215Q9UL58 517 aaPredicted RBP13.7□□□□□ -0.22
HMGB2-201ENST00000296503 XRCC6P12956 609 aaKnown RBP eCLIP13.7□□□□□ -0.22
HMGB2-201ENST00000296503 CYP2C18P33260 490 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 MCM2P49736 904 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 HMGN5P82970 282 aaKnown RBP13.7□□□□□ -0.22
HMGB2-201ENST00000296503 KRT40Q6A162 431 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 GDF6Q6KF10 455 aaPredicted RBP13.7□□□□□ -0.22
HMGB2-201ENST00000296503 MFSD5Q6N075 450 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 PIK3AP1Q6ZUJ8 805 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 TRIM50Q86XT4 487 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 TMEM199Q8N511 208 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 PKNOX2Q96KN3 472 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 PRO3102Q9H379 93 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 TBC1D22BQ9NU19 505 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 GTF2IRD1Q9UHL9 959 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 TCEAL9Q9UHQ7 104 aa13.7□□□□□ -0.22
HMGB2-201ENST00000296503 EDIL3O43854 480 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 MCM4P33991 863 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 CCL23P55773 120 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 ACTR2P61160 394 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 GUCY1B3Q02153 619 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 FPGSQ05932 587 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 SAFBQ15424 915 aaKnown RBP eCLIP13.69□□□□□ -0.22
HMGB2-201ENST00000296503 LETM2Q2VYF4 491 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 SESTD1Q86VW0 696 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 TMX3Q96JJ7 454 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 C8orf76Q96K31 380 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 SMARCAD1Q9H4L7 1026 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 AZI2Q9H6S1 392 aa13.69□□□□□ -0.22
HMGB2-201ENST00000296503 CD2BP2O95400 341 aaKnown RBP13.68□□□□□ -0.22
HMGB2-201ENST00000296503 MMP1P03956 469 aa13.68□□□□□ -0.22
HMGB2-201ENST00000296503 NR5A1Q13285 461 aa13.68□□□□□ -0.22
HMGB2-201ENST00000296503 RETREG2Q8NC44 543 aa13.68□□□□□ -0.22
HMGB2-201ENST00000296503 NOC4LQ9BVI4 516 aaKnown RBP13.68□□□□□ -0.22
HMGB2-201ENST00000296503 RNPEPQ9H4A4 650 aa13.68□□□□□ -0.22
HMGB2-201ENST00000296503 UMODL1Q5DID0 1318 aa13.68□□□□□ -0.22
HMGB2-201ENST00000296503 C17orf102A2RUQ5 167 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 BTBD18B2RXH4 712 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 MSH4O15457 936 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 DHX15O43143 795 aaKnown RBP13.67□□□□□ -0.22
HMGB2-201ENST00000296503 TDP2O95551 362 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 SMIM10L2AP0DMW4 78 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 SMIM10L2BP0DMW5 78 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 MARK3P27448 753 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 ZNF200P98182 395 aaPredicted RBP13.67□□□□□ -0.22
HMGB2-201ENST00000296503 Q4G0T1 1027 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 NEK8Q86SG6 692 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 DIS3L2Q8IYB7 885 aaKnown RBP13.67□□□□□ -0.22
HMGB2-201ENST00000296503 TDHQ8IZJ6 230 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 ERAP1Q9NZ08 941 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 CYP3A7-CYP3A51PA0A087WV96 503 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 A0A1W2PPC1 479 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 BACH1O14867 736 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 CCNT1O60563 726 aaKnown RBP13.67□□□□□ -0.22
HMGB2-201ENST00000296503 HSP90AA1P07900 732 aaKnown RBP13.67□□□□□ -0.22
HMGB2-201ENST00000296503 GNAT1P11488 350 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 CSF2RAP15509 400 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 PTMSP20962 102 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 CYP3A7P24462 503 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 STAT5BP51692 787 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 PPIGQ13427 754 aaKnown RBP eCLIP13.67□□□□□ -0.226e-6■□□□□ 9.4
HMGB2-201ENST00000296503 BFSP2Q13515 415 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 ATP6V0A1Q93050 837 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 LENG9Q96B70 501 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 SETD4Q9NVD3 440 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 CHMP5Q9NZZ3 219 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 DDX25Q9UHL0 483 aaKnown RBP13.67□□□□□ -0.22
HMGB2-201ENST00000296503 SAMM50Q9Y512 469 aa13.67□□□□□ -0.22
HMGB2-201ENST00000296503 MARCH6O60337 910 aa13.66□□□□□ -0.22
HMGB2-201ENST00000296503 LGR5O75473 907 aa13.66□□□□□ -0.22
HMGB2-201ENST00000296503 ATG7O95352 703 aa13.66□□□□□ -0.22
HMGB2-201ENST00000296503 CCNE2O96020 404 aa13.66□□□□□ -0.22
HMGB2-201ENST00000296503 EARS2Q5JPH6 523 aaKnown RBP13.66□□□□□ -0.22
HMGB2-201ENST00000296503 MIS18BP1Q6P0N0 1132 aa13.66□□□□□ -0.22
HMGB2-201ENST00000296503 MOXD1Q6UVY6 613 aa13.66□□□□□ -0.22
HMGB2-201ENST00000296503 ABHD15Q6UXT9 468 aa13.66□□□□□ -0.22
HMGB2-201ENST00000296503 CCDC155Q8N6L0 562 aa13.66□□□□□ -0.22
HMGB2-201ENST00000296503 SCLYQ96I15 445 aa13.66□□□□□ -0.22
HMGB2-201ENST00000296503 NAP1L4Q99733 375 aaKnown RBP13.66□□□□□ -0.22
HMGB2-201ENST00000296503 GAS7O60861 476 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 ACRP10323 421 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 KRT76Q01546 638 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 PTK7Q13308 1070 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 GNL2Q13823 731 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms