RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 MRPS25P82663 173 aaKnown RBP11.9□□□□□ -0.5
PBRM1-201ENST00000296302 CAV1Q03135 178 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 TCP10Q12799 353 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 ZC3H18Q86VM9 953 aaKnown RBP11.9□□□□□ -0.5
PBRM1-201ENST00000296302 GSPT2Q8IYD1 628 aaKnown RBP11.9□□□□□ -0.5
PBRM1-201ENST00000296302 ORAI2Q96SN7 254 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 ZNF277Q9NRM2 450 aaPredicted RBP11.9□□□□□ -0.5
PBRM1-201ENST00000296302 DNAJC5BQ9UF47 199 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 PCDHB4Q9Y5E5 795 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 A0A1W2PQC6 194 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 GYG2O15488 501 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 UNC13DQ70J99 1090 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.9□□□□□ -0.56e-6■■■■■ 28.1
PBRM1-201ENST00000296302 YIPF3Q9GZM5 350 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 YY1AP1Q9H869 796 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 TRPA1O75762 1119 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 TMEM191BP0C7N4 346 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 TMCO4Q5TGY1 634 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 SLFN13Q68D06 897 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 MCF2L2Q86YR7 1114 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 ARHGAP18Q8N392 663 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 CXorf38Q8TB03 319 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 SLC24A3Q9HC58 644 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 MID2Q9UJV3 735 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 SNX24Q9Y343 169 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 ECE1P42892 770 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 BTDP43251 543 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 RCAN1P53805 252 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 GABPAQ06546 454 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 MYO1EQ12965 1108 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 TMED1Q13445 227 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 IQCB1Q15051 598 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 PDIK1LQ8N165 341 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 MXD3Q9BW11 206 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 PLS3P13797 630 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 CAPRIN2Q6IMN6 1127 aaKnown RBP11.89□□□□□ -0.51
PBRM1-201ENST00000296302 WDR11Q9BZH6 1224 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 UBE2TQ9NPD8 197 aaPredicted RBP11.89□□□□□ -0.51
PBRM1-201ENST00000296302 KDM6BO15054 1643 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 A6NJR5 290 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 PPP1R37O75864 691 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 APOEP02649 317 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 PLA2G4BP0C869 781 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 ACTN1P12814 892 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 MUM1L1Q5H9M0 696 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 CCDC17Q96LX7 622 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 NACC1Q96RE7 527 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 CCNL1Q9UK58 526 aaPredicted RBP11.89□□□□□ -0.51
PBRM1-201ENST00000296302 CLIC2O15247 247 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 TTI1O43156 1089 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 PMS2P54278 862 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 PDCD2Q16342 344 aaPredicted RBP11.89□□□□□ -0.51
PBRM1-201ENST00000296302 GRAMD1BQ3KR37 738 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 LCORLQ8N3X6 602 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 SLITRK6Q9H5Y7 841 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 MLXIPQ9HAP2 919 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 KAT6BQ8WYB5 2073 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 LRRC53A6NM62 1247 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 HNRNPDLO14979 420 aaKnown RBP11.89□□□□□ -0.51
PBRM1-201ENST00000296302 TMOD1P28289 359 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 MXI1P50539 228 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 PYROXD1Q8WU10 500 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 HOOK2Q96ED9 719 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 MTA3Q9BTC8 594 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 TRAIPQ9BWF2 469 aa11.89□□□□□ -0.51
PBRM1-201ENST00000296302 GPHNQ9NQX3 736 aaPredicted RBP11.89□□□□□ -0.51
PBRM1-201ENST00000296302 TESPA1A2RU30 521 aaPredicted RBP11.88□□□□□ -0.51
PBRM1-201ENST00000296302 TEX33O43247 280 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 ICA1Q05084 483 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 TSGA10IPQ3SY00 556 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 BATF3Q9NR55 127 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 THRAP3Q9Y2W1 955 aaKnown RBP11.88□□□□□ -0.51
PBRM1-201ENST00000296302 TTC26A0AVF1 554 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 HDLBPQ00341 1268 aaKnown RBP11.88□□□□□ -0.51
PBRM1-201ENST00000296302 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
PBRM1-201ENST00000296302 TRIP13Q15645 432 aaPredicted RBP11.88□□□□□ -0.51
PBRM1-201ENST00000296302 CERKLQ49MI3 558 aaPredicted RBP11.88□□□□□ -0.51
PBRM1-201ENST00000296302 NFRKBQ6P4R8 1299 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 TRIML2Q8N7C3 387 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 MAML1Q92585 1016 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 GRAMD1AQ96CP6 724 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 PVALEFA0A1B0GWK0 134 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 FAM187AA6NFU0 413 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 RASA4BC9J798 803 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 H0Y3Z8 333 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 RASA4O43374 803 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 PRKAB2O43741 272 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 TOM1L1O75674 476 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 PRCPP42785 496 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 KPNA2P52292 529 aaKnown RBP11.88□□□□□ -0.51
PBRM1-201ENST00000296302 BASP1P80723 227 aaKnown RBP11.88□□□□□ -0.51
PBRM1-201ENST00000296302 DNAJC24Q6P3W2 148 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 CRLF3Q8IUI8 442 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 PIP4K2CQ8TBX8 421 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 HDAC11Q96DB2 347 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 NRBF2Q96F24 287 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 LRRC37BQ96QE4 947 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.88□□□□□ -0.512e-6■■□□□ 12.7
PBRM1-201ENST00000296302 EPN3Q9H201 632 aa11.88□□□□□ -0.51
PBRM1-201ENST00000296302 SEPT10Q9P0V9 454 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms