RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 KLRC3Q07444 240 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 PAK2Q13177 524 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 ODR4Q5SWX8 454 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 ALKBH5Q6P6C2 394 aaKnown RBP17.43■□□□□ 0.38
SMAD6-201ENST00000288840 PHLDB2Q86SQ0 1253 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 ZFPM1Q8IX07 1006 aa17.43■□□□□ 0.38
SMAD6-201ENST00000288840 COL1A1P02452 1464 aaPredicted RBP17.42■□□□□ 0.38
SMAD6-201ENST00000288840 PVALEFA0A1B0GWK0 134 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 PSMD14O00487 310 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 MMP10P09238 476 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 KLRC1P26715 233 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 CRKP46108 304 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 PNMA5Q96PV4 448 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 SELENOSQ9BQE4 189 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 BLOC1S4Q9NUP1 217 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 STIM2Q9P246 746 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 CTTNBP2NLQ9P2B4 639 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 CHORDC1Q9UHD1 332 aaPredicted RBP17.42■□□□□ 0.38
SMAD6-201ENST00000288840 RSPH10B2B2RC85 870 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 RSPH10BP0C881 870 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 MYBL2P10244 700 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 STAT1P42224 750 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 CETN1Q12798 172 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 FAM184BQ9ULE4 1060 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 RAD17O75943 681 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 H2AFZP0C0S5 128 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 GBP6Q6ZN66 633 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 H2AFVQ71UI9 128 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 DYDC1Q8WWB3 177 aa17.42■□□□□ 0.38
SMAD6-201ENST00000288840 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.42■□□□□ 0.381e-8■■■■■ 47.9
SMAD6-201ENST00000288840 BACH1O14867 736 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 SERPING1P05155 500 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 PPP4CP60510 307 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 PPFIA1Q13136 1202 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 TNIP1Q15025 636 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 LRCH2Q5VUJ6 765 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 CDC42EP5Q6NZY7 148 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 DDX47Q9H0S4 455 aaKnown RBP17.41■□□□□ 0.38
SMAD6-201ENST00000288840 APBA3O96018 575 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 TRIM49P0CI25 452 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 TRIM49CP0CI26 452 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 TMEM132AQ24JP5 1023 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 PDXDC1Q6P996 788 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 OTUD6BQ8N6M0 293 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 CYP2W1Q8TAV3 490 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 BICD1Q96G01 975 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 SH2D4AQ9H788 454 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 PLAGL2Q9UPG8 496 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 BAZ2AQ9UIF9 1905 aaKnown RBP17.41■□□□□ 0.38
SMAD6-201ENST00000288840 SRCAPQ6ZRS2 3230 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 A0A087X0T9 212 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 FAM228BP0C875 321 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 NMT1P30419 496 aaKnown RBP17.41■□□□□ 0.38
SMAD6-201ENST00000288840 MNAT1P51948 309 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 PSMC6P62333 389 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 CCNI2Q6ZMN8 369 aaPredicted RBP17.41■□□□□ 0.38
SMAD6-201ENST00000288840 DDX42Q86XP3 938 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMAD6-201ENST00000288840 LRRC15Q8TF66 581 aa17.41■□□□□ 0.38
SMAD6-201ENST00000288840 E7EVH7 732 aa17.4■□□□□ 0.38
SMAD6-201ENST00000288840 PPIP5K2O43314 1243 aa17.4■□□□□ 0.38
SMAD6-201ENST00000288840 AFPP02771 609 aaKnown RBP17.4■□□□□ 0.38
SMAD6-201ENST00000288840 CTNNA1P35221 906 aaKnown RBP17.4■□□□□ 0.38
SMAD6-201ENST00000288840 CARSP49589 748 aaKnown RBP17.4■□□□□ 0.38
SMAD6-201ENST00000288840 MTMR8Q96EF0 704 aa17.4■□□□□ 0.38
SMAD6-201ENST00000288840 MMTAG2Q9BU76 263 aaKnown RBP17.4■□□□□ 0.38
SMAD6-201ENST00000288840 MYBP10242 640 aa17.4■□□□□ 0.38
SMAD6-201ENST00000288840 NSMFQ6X4W1 530 aa17.4■□□□□ 0.38
SMAD6-201ENST00000288840 EHD4Q9H223 541 aa17.4■□□□□ 0.38
SMAD6-201ENST00000288840 HARSP12081 509 aaKnown RBP17.4■□□□□ 0.38
SMAD6-201ENST00000288840 KRT71Q3SY84 523 aa17.4■□□□□ 0.38
SMAD6-201ENST00000288840 ZC2HC1CQ53FD0 456 aaPredicted RBP17.4■□□□□ 0.38
SMAD6-201ENST00000288840 ZNF507Q8TCN5 953 aa17.4■□□□□ 0.38
SMAD6-201ENST00000288840 GOLGA6L7A0A1B0GV03 622 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 BMP3P12645 472 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 VPS41P49754 854 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 ZNF211Q13398 564 aaPredicted RBP17.39■□□□□ 0.37
SMAD6-201ENST00000288840 NNTQ13423 1086 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 TTC31Q49AM3 519 aaPredicted RBP17.39■□□□□ 0.37
SMAD6-201ENST00000288840 STXBP4Q6ZWJ1 553 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 SLFN12Q8IYM2 578 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 MSANTD4Q8NCY6 345 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 FGFBP2Q9BYJ0 223 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 HPCAL4Q9UM19 191 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 GSTTP1A0A1W2PQM5 241 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 CENPPQ6IPU0 288 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 HOMEZQ8IX15 550 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 FAM186BQ8IYM0 893 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 COA1Q9GZY4 146 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 CNTNAP4Q9C0A0 1308 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 GNA14O95837 355 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 ZNF746Q6NUN9 644 aaPredicted RBP17.39■□□□□ 0.37
SMAD6-201ENST00000288840 LMBR1Q8WVP7 490 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 ERGIC2Q96RQ1 377 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 QTRT2Q9H974 415 aaKnown RBP17.39■□□□□ 0.37
SMAD6-201ENST00000288840 PI4KBQ9UBF8 816 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 LCMT1Q9UIC8 334 aa17.39■□□□□ 0.37
SMAD6-201ENST00000288840 LAMA4Q16363 1823 aa17.38■□□□□ 0.37
SMAD6-201ENST00000288840 GOLGA8IPA6NC78 632 aa17.38■□□□□ 0.37
SMAD6-201ENST00000288840 GOLGA8JA6NMD2 632 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms