RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 UPP2O95045 317 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 HOXC8P31273 242 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 KCNQ1P51787 676 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 NAPAP54920 295 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 FGD1P98174 961 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 PPFIA1Q13136 1202 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 PTPROQ16827 1216 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 TCTN1Q2MV58 587 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 TAF2Q6P1X5 1199 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 TMTC3Q6ZXV5 915 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 LMBR1Q8WVP7 490 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 SAMD11Q96NU1 681 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 IFIH1Q9BYX4 1025 aaKnown RBP16.09■□□□□ 0.17
TPM1-202ENST00000288398 AZI2Q9H6S1 392 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 NAP1L2Q9ULW6 460 aaPredicted RBP16.09■□□□□ 0.17
TPM1-202ENST00000288398 PCDHA6Q9UN73 950 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 PCDHA8Q9Y5H6 950 aa16.09■□□□□ 0.17
TPM1-202ENST00000288398 TRANK1O15050 2925 aa16.08■□□□□ 0.16
TPM1-202ENST00000288398 MAFGO15525 162 aa16.08■□□□□ 0.16
TPM1-202ENST00000288398 MARK3P27448 753 aa16.08■□□□□ 0.16
TPM1-202ENST00000288398 NECTIN1Q15223 517 aa16.08■□□□□ 0.16
TPM1-202ENST00000288398 SPRED2Q7Z698 418 aa16.08■□□□□ 0.16
TPM1-202ENST00000288398 NEK1Q96PY6 1258 aa16.08■□□□□ 0.16
TPM1-202ENST00000288398 SDF4Q9BRK5 362 aa16.08■□□□□ 0.16
TPM1-202ENST00000288398 SMARCAD1Q9H4L7 1026 aa16.08■□□□□ 0.16
TPM1-202ENST00000288398 SUGCTQ9HAC7 445 aa16.08■□□□□ 0.16
TPM1-202ENST00000288398 PRRC2BQ5JSZ5 2229 aaKnown RBP16.07■□□□□ 0.16
TPM1-202ENST00000288398 ZBTB43O43298 467 aa16.07■□□□□ 0.16
TPM1-202ENST00000288398 RPLP2P05387 115 aaKnown RBP16.07■□□□□ 0.16
TPM1-202ENST00000288398 BMP1P13497 986 aa16.07■□□□□ 0.16
TPM1-202ENST00000288398 KRT32Q14532 448 aa16.07■□□□□ 0.16
TPM1-202ENST00000288398 GRIK4Q16099 956 aa16.07■□□□□ 0.16
TPM1-202ENST00000288398 RTN1Q16799 776 aa16.07■□□□□ 0.16
TPM1-202ENST00000288398 BMP2KLQ5H9B9 411 aa16.07■□□□□ 0.16
TPM1-202ENST00000288398 SGMS1Q86VZ5 419 aa16.07■□□□□ 0.16
TPM1-202ENST00000288398 JPH1Q9HDC5 661 aaPredicted RBP16.07■□□□□ 0.16
TPM1-202ENST00000288398 JADE2Q9NQC1 790 aa16.07■□□□□ 0.16
TPM1-202ENST00000288398 TUBE1Q9UJT0 475 aa16.07■□□□□ 0.16
TPM1-202ENST00000288398 SPTBN5Q9NRC6 3674 aaKnown RBP16.06■□□□□ 0.16
TPM1-202ENST00000288398 COL4A4P53420 1690 aaPredicted RBP16.06■□□□□ 0.16
TPM1-202ENST00000288398 M0QZ92 97 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 LPXNO60711 386 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 FOSP01100 380 aaPredicted RBP16.06■□□□□ 0.16
TPM1-202ENST00000288398 KCNA2P16389 499 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 ITGB5P18084 799 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 ADCY7P51828 1080 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 IGBP1P78318 339 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 HTRA4P83105 476 aaPredicted RBP16.06■□□□□ 0.16
TPM1-202ENST00000288398 PPP1R18Q6NYC8 613 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 CENPQQ7L2Z9 268 aaPredicted RBP16.06■□□□□ 0.16
TPM1-202ENST00000288398 TEX2Q8IWB9 1127 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 NECAB3Q96P71 396 aaPredicted RBP16.06■□□□□ 0.16
TPM1-202ENST00000288398 C17orf80Q9BSJ5 609 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 GLT8D2Q9H1C3 349 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 TRPC6Q9Y210 931 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 UBIAD1Q9Y5Z9 338 aa16.06■□□□□ 0.16
TPM1-202ENST00000288398 RRN3P2A6NIE6 340 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 GOLGA8AA7E2F4 631 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 GOLGA8BA8MQT2 603 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 hCG_1984214I3L0E3 225 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 ATP9AO75110 1047 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 HMGB1P09429 215 aaKnown RBP16.05■□□□□ 0.16
TPM1-202ENST00000288398 GHRP10912 638 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 ZNF76P36508 570 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 TIGD5Q53EQ6 642 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 FAM26DQ5JW98 314 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 APOA5Q6Q788 366 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 DHX32Q7L7V1 743 aaKnown RBP16.05■□□□□ 0.16
TPM1-202ENST00000288398 ZNF713Q8N859 430 aaPredicted RBP16.05■□□□□ 0.16
TPM1-202ENST00000288398 TOP1MTQ969P6 601 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 C1QTNF1Q9BXJ1 281 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 SLC9A2Q9UBY0 812 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 PTPRSQ13332 1948 aa16.05■□□□□ 0.16
TPM1-202ENST00000288398 CDC45O75419 566 aa16.04■□□□□ 0.16
TPM1-202ENST00000288398 COL9A1P20849 921 aa16.04■□□□□ 0.16
TPM1-202ENST00000288398 EPC2Q52LR7 807 aa16.04■□□□□ 0.16
TPM1-202ENST00000288398 IER5Q5VY09 327 aa16.04■□□□□ 0.16
TPM1-202ENST00000288398 WWC2Q6AWC2 1192 aa16.04■□□□□ 0.16
TPM1-202ENST00000288398 FIBCD1Q8N539 461 aa16.04■□□□□ 0.16
TPM1-202ENST00000288398 SP7Q8TDD2 431 aaPredicted RBP16.04■□□□□ 0.16
TPM1-202ENST00000288398 IL17RAQ96F46 866 aa16.04■□□□□ 0.16
TPM1-202ENST00000288398 MXRA8Q9BRK3 442 aa16.04■□□□□ 0.16
TPM1-202ENST00000288398 RIC8AQ9NPQ8 531 aa16.04■□□□□ 0.16
TPM1-202ENST00000288398 TELO2Q9Y4R8 837 aa16.04■□□□□ 0.16
TPM1-202ENST00000288398 CNTNAP5Q8WYK1 1306 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 KLF18A0A0U1RQI7 1052 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 CCDC196A0A1B0GTZ2 297 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 GSTTP1A0A1W2PQM5 241 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 ADAM17P78536 824 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 GPM6BQ13491 265 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 RUFY4Q6ZNE9 571 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 EP400NLQ6ZTU2 488 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 RPAINQ86UA6 219 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 TMEM192Q8IY95 271 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 DNAJB3Q8WWF6 145 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 MRPL38Q96DV4 380 aaKnown RBP16.03■□□□□ 0.16
TPM1-202ENST00000288398 FAM49AQ9H0Q0 323 aaPredicted RBP16.03■□□□□ 0.16
TPM1-202ENST00000288398 UBE2ZQ9H832 354 aaPredicted RBP16.03■□□□□ 0.16
TPM1-202ENST00000288398 KCNH7Q9NS40 1196 aa16.03■□□□□ 0.16
TPM1-202ENST00000288398 TCEAL9Q9UHQ7 104 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms