RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 M0QZ92 97 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 PLA2G4BP0C869 781 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 AP3M2P53677 418 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 PARVGQ9HBI0 331 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 PFASO15067 1338 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 TECP42680 631 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 E2F4Q16254 413 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 TMCO3Q6UWJ1 677 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 PNMA8AQ86V59 439 aaPredicted RBP9.03□□□□□ -0.96
PTPN3-201ENST00000262539 LDHDQ86WU2 507 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 FAM178BQ8IXR5 827 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.03□□□□□ -0.96
PTPN3-201ENST00000262539 KIFAP3Q92845 792 aa9.03□□□□□ -0.96
PTPN3-201ENST00000262539 XIRP1Q702N8 1843 aaKnown RBP9.03□□□□□ -0.96
PTPN3-201ENST00000262539 GBP6Q6ZN66 633 aa9.02□□□□□ -0.96
PTPN3-201ENST00000262539 PPP1R9AQ9ULJ8 1098 aa9.02□□□□□ -0.96
PTPN3-201ENST00000262539 HSPA6P17066 643 aa9.02□□□□□ -0.96
PTPN3-201ENST00000262539 CDC42EP1Q00587 391 aa9.02□□□□□ -0.96
PTPN3-201ENST00000262539 KCTD2Q14681 263 aa9.02□□□□□ -0.96
PTPN3-201ENST00000262539 NCAPH2Q6IBW4 605 aa9.02□□□□□ -0.96
PTPN3-201ENST00000262539 DHX38Q92620 1227 aaKnown RBP9.02□□□□□ -0.96
PTPN3-201ENST00000262539 MTMR9Q96QG7 549 aa9.02□□□□□ -0.96
PTPN3-201ENST00000262539 MIS12Q9H081 205 aa9.02□□□□□ -0.96
PTPN3-201ENST00000262539 EMILIN3Q9NT22 766 aa9.02□□□□□ -0.96
PTPN3-201ENST00000262539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.02□□□□□ -0.96
PTPN3-201ENST00000262539 CTAGE9A4FU28 777 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 PSMD14O00487 310 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 MFAP3LO75121 409 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 GHRHRQ02643 423 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 CTNND2Q9UQB3 1225 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 TJP1Q07157 1748 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 RREB1Q92766 1687 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 HARSP12081 509 aaKnown RBP9.02□□□□□ -0.97
PTPN3-201ENST00000262539 CNGA1P29973 690 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 CHRNA5P30532 468 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 PSMC5P62195 406 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 FKBP1BP68106 108 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 INTS8Q75QN2 995 aaKnown RBP9.02□□□□□ -0.97
PTPN3-201ENST00000262539 CACTINQ8WUQ7 758 aaKnown RBP9.02□□□□□ -0.97
PTPN3-201ENST00000262539 NMT2O60551 498 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 SLFN12LQ6IEE8 588 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 FRMD5Q7Z6J6 570 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 SYCE1Q8N0S2 351 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 RUBCNQ92622 972 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 COA7Q96BR5 231 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 TRIM6Q9C030 488 aaPredicted RBP9.02□□□□□ -0.97
PTPN3-201ENST00000262539 GINS2Q9Y248 185 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 COL1A1P02452 1464 aaPredicted RBP9.02□□□□□ -0.97
PTPN3-201ENST00000262539 CUL4BQ13620 913 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 BMS1Q14692 1282 aaKnown RBP9.02□□□□□ -0.97
PTPN3-201ENST00000262539 C16orf45Q96MC5 204 aaPredicted RBP9.02□□□□□ -0.97
PTPN3-201ENST00000262539 AZI2Q9H6S1 392 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 PANK4Q9NVE7 773 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 FAM198AQ9UFP1 575 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 KIAA1024Q9UPX6 916 aa9.02□□□□□ -0.97
PTPN3-201ENST00000262539 ZNF280CQ8ND82 737 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 PRMT6Q96LA8 375 aaPredicted RBP9.01□□□□□ -0.97
PTPN3-201ENST00000262539 NDST4Q9H3R1 872 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 SCN7AQ01118 1682 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 NOP56O00567 594 aaKnown RBP9.01□□□□□ -0.97
PTPN3-201ENST00000262539 URI1O94763 535 aaPredicted RBP9.01□□□□□ -0.97
PTPN3-201ENST00000262539 ALAS1P13196 640 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 OSBPP22059 807 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 RTP1P59025 263 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 NCAPHQ15003 741 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 ZNF746Q6NUN9 644 aaPredicted RBP9.01□□□□□ -0.97
PTPN3-201ENST00000262539 PDXDC2PQ6P474 469 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 ENOSF1Q7L5Y1 443 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 CMTR1Q8N1G2 835 aaKnown RBP9.01□□□□□ -0.97
PTPN3-201ENST00000262539 CRACR2AQ9BSW2 395 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 TIAM2Q8IVF5 1701 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 RGPD2P0DJD1 1756 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 hCG_1642624A0A1W2PR95 340 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 SHTN1A0MZ66 631 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 GDF11O95390 407 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 LDHAP00338 332 aaKnown RBP9.01□□□□□ -0.97
PTPN3-201ENST00000262539 CCND2P30279 289 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 QARSP47897 775 aaKnown RBP9.01□□□□□ -0.97
PTPN3-201ENST00000262539 STX17P56962 302 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 MAP3K10Q02779 954 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 NPY5RQ15761 445 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 ACCSQ96QU6 501 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 ZNF577Q9BSK1 485 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 CYTH3O43739 400 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 DGAT1O75907 488 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 PSAPP07602 524 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 SLC26A2P50443 739 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 TMEM119Q4V9L6 283 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 TCP11X2Q5H9J9 407 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 CCDC63Q8NA47 563 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 TRIM11Q96F44 468 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 RNF146Q9NTX7 359 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 NOC2LQ9Y3T9 749 aaKnown RBP9.01□□□□□ -0.97
PTPN3-201ENST00000262539 FRMPD2Q68DX3 1309 aaPredicted RBP9.01□□□□□ -0.97
PTPN3-201ENST00000262539 A0A0G2JLW4 131 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 GAS8O95995 478 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 HLTFQ14527 1009 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTPN3-201ENST00000262539 KYAT1Q16773 422 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 GSTA5Q7RTV2 222 aa9.01□□□□□ -0.97
PTPN3-201ENST00000262539 DDX4Q9NQI0 724 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms