RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 EMSYQ7Z589 1322 aa28.5■■■□□ 2.15
LSM7-201ENST00000252622 PITPNM1O00562 1244 aa28.5■■■□□ 2.15
LSM7-201ENST00000252622 HOXC8P31273 242 aa28.5■■■□□ 2.15
LSM7-201ENST00000252622 NONOQ15233 471 aaKnown RBP eCLIP28.5■■■□□ 2.15
LSM7-201ENST00000252622 CCDC83Q8IWF9 413 aa28.5■■■□□ 2.15
LSM7-201ENST00000252622 LENG9Q96B70 501 aa28.5■■■□□ 2.15
LSM7-201ENST00000252622 GJB4Q9NTQ9 266 aa28.5■■■□□ 2.15
LSM7-201ENST00000252622 IPO5O00410 1097 aaKnown RBP28.49■■■□□ 2.15
LSM7-201ENST00000252622 ST18O60284 1047 aa28.49■■■□□ 2.15
LSM7-201ENST00000252622 SMIM10L2AP0DMW4 78 aa28.49■■■□□ 2.15
LSM7-201ENST00000252622 SMIM10L2BP0DMW5 78 aa28.49■■■□□ 2.15
LSM7-201ENST00000252622 CSF2RAP15509 400 aa28.49■■■□□ 2.15
LSM7-201ENST00000252622 BFSP2Q13515 415 aa28.49■■■□□ 2.15
LSM7-201ENST00000252622 SHHQ15465 462 aa28.49■■■□□ 2.15
LSM7-201ENST00000252622 PRR16Q569H4 304 aa28.49■■■□□ 2.15
LSM7-201ENST00000252622 C9orf50Q5SZB4 431 aa28.49■■■□□ 2.15
LSM7-201ENST00000252622 CCDC155Q8N6L0 562 aa28.49■■■□□ 2.15
LSM7-201ENST00000252622 CAGE1Q8TC20 777 aa28.49■■■□□ 2.15
LSM7-201ENST00000252622 ZNF577Q9BSK1 485 aa28.49■■■□□ 2.15
LSM7-201ENST00000252622 DHX15O43143 795 aaKnown RBP28.48■■■□□ 2.15
LSM7-201ENST00000252622 LGR5O75473 907 aa28.48■■■□□ 2.15
LSM7-201ENST00000252622 CCL23P55773 120 aa28.48■■■□□ 2.15
LSM7-201ENST00000252622 ACTR2P61160 394 aa28.48■■■□□ 2.15
LSM7-201ENST00000252622 RBL2Q08999 1139 aa28.48■■■□□ 2.15
LSM7-201ENST00000252622 TBC1D22BQ9NU19 505 aa28.48■■■□□ 2.15
LSM7-201ENST00000252622 C17orf102A2RUQ5 167 aa28.47■■■□□ 2.15
LSM7-201ENST00000252622 PTK7Q13308 1070 aa28.47■■■□□ 2.15
LSM7-201ENST00000252622 MOXD1Q6UVY6 613 aa28.47■■■□□ 2.15
LSM7-201ENST00000252622 SMARCAD1Q9H4L7 1026 aa28.47■■■□□ 2.15
LSM7-201ENST00000252622 IL23AQ9NPF7 189 aa28.47■■■□□ 2.15
LSM7-201ENST00000252622 ERAP1Q9NZ08 941 aa28.47■■■□□ 2.15
LSM7-201ENST00000252622 CYP3A7-CYP3A51PA0A087WV96 503 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 CCDC194A0A1B0GVG4 234 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 ATG7O95352 703 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 CCNE2O96020 404 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 CYP3A7P24462 503 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 HIC1Q14526 733 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 PSRC1Q6PGN9 363 aaPredicted RBP28.46■■■□□ 2.15
LSM7-201ENST00000252622 RETREG2Q8NC44 543 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 OXER1Q8TDS5 423 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 DHX38Q92620 1227 aaKnown RBP28.46■■■□□ 2.15
LSM7-201ENST00000252622 GLG1Q92896 1179 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 PCYT2Q99447 389 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 BACH2Q9BYV9 841 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 BRMS1Q9HCU9 246 aa28.46■■■□□ 2.15
LSM7-201ENST00000252622 TANC1Q9C0D5 1861 aa28.45■■■□□ 2.15
LSM7-201ENST00000252622 KRT2P35908 639 aa28.45■■■□□ 2.14
LSM7-201ENST00000252622 Q4G0T1 1027 aa28.45■■■□□ 2.14
LSM7-201ENST00000252622 C16orf59Q7L2K0 433 aa28.45■■■□□ 2.14
LSM7-201ENST00000252622 AFAP1L1Q8TED9 768 aa28.45■■■□□ 2.14
LSM7-201ENST00000252622 MBOAT7Q96N66 472 aa28.45■■■□□ 2.14
LSM7-201ENST00000252622 RNPEPQ9H4A4 650 aa28.45■■■□□ 2.14
LSM7-201ENST00000252622 AZI2Q9H6S1 392 aa28.45■■■□□ 2.14
LSM7-201ENST00000252622 DDX39AO00148 427 aaKnown RBP28.44■■■□□ 2.14
LSM7-201ENST00000252622 SOX1O00570 391 aaPredicted RBP28.44■■■□□ 2.14
LSM7-201ENST00000252622 GNAT1P11488 350 aa28.44■■■□□ 2.14
LSM7-201ENST00000252622 RFC2P35250 354 aa28.44■■■□□ 2.14
LSM7-201ENST00000252622 HMGN5P82970 282 aaKnown RBP28.44■■■□□ 2.14
LSM7-201ENST00000252622 ZNF200P98182 395 aaPredicted RBP28.44■■■□□ 2.14
LSM7-201ENST00000252622 TRIM29Q14134 588 aa28.44■■■□□ 2.14
LSM7-201ENST00000252622 INF2Q27J81 1249 aa28.44■■■□□ 2.14
LSM7-201ENST00000252622 SERINC5Q86VE9 423 aa28.44■■■□□ 2.14
LSM7-201ENST00000252622 SCLYQ96I15 445 aa28.44■■■□□ 2.14
LSM7-201ENST00000252622 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.44■■■□□ 2.148e-8■■□□□ 12
LSM7-201ENST00000252622 LAMA3Q16787 3333 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 IGKV6D-21A0A0A0MT36 114 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 MSH4O15457 936 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 TDP2O95551 362 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 MMP1P03956 469 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 KRT76Q01546 638 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 TRIM71Q2Q1W2 868 aaKnown RBP28.43■■■□□ 2.14
LSM7-201ENST00000252622 TMEM240Q5SV17 173 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 ZNF746Q6NUN9 644 aaPredicted RBP28.43■■■□□ 2.14
LSM7-201ENST00000252622 ABHD15Q6UXT9 468 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 PLPPR4Q7Z2D5 763 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 TNFRSF25Q93038 417 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 ATP6V0A1Q93050 837 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 RNPC3Q96LT9 517 aaKnown RBP28.43■■■□□ 2.14
LSM7-201ENST00000252622 NRCAMQ92823 1304 aa28.43■■■□□ 2.14
LSM7-201ENST00000252622 PFKMP08237 780 aa28.42■■■□□ 2.14
LSM7-201ENST00000252622 IQCF3P0C7M6 154 aa28.42■■■□□ 2.14
LSM7-201ENST00000252622 ACRP10323 421 aa28.42■■■□□ 2.14
LSM7-201ENST00000252622 KRT40Q6A162 431 aa28.42■■■□□ 2.14
LSM7-201ENST00000252622 PIK3AP1Q6ZUJ8 805 aa28.42■■■□□ 2.14
LSM7-201ENST00000252622 NEK8Q86SG6 692 aa28.42■■■□□ 2.14
LSM7-201ENST00000252622 SMAP1Q8IYB5 467 aaPredicted RBP28.42■■■□□ 2.14
LSM7-201ENST00000252622 RPUSD2Q8IZ73 545 aaKnown RBP28.42■■■□□ 2.14
LSM7-201ENST00000252622 SLC5A5Q92911 643 aa28.42■■■□□ 2.14
LSM7-201ENST00000252622 RIT2Q99578 217 aa28.42■■■□□ 2.14
LSM7-201ENST00000252622 SETD4Q9NVD3 440 aa28.42■■■□□ 2.14
LSM7-201ENST00000252622 TCEAL9Q9UHQ7 104 aa28.42■■■□□ 2.14
LSM7-201ENST00000252622 SELPP16109 830 aa28.41■■■□□ 2.14
LSM7-201ENST00000252622 MARK3P27448 753 aa28.41■■■□□ 2.14
LSM7-201ENST00000252622 SLC26A2P50443 739 aa28.41■■■□□ 2.14
LSM7-201ENST00000252622 STAT5BP51692 787 aa28.41■■■□□ 2.14
LSM7-201ENST00000252622 ADAM17P78536 824 aa28.41■■■□□ 2.14
LSM7-201ENST00000252622 MIS18BP1Q6P0N0 1132 aa28.41■■■□□ 2.14
LSM7-201ENST00000252622 LMBR1Q8WVP7 490 aa28.41■■■□□ 2.14
LSM7-201ENST00000252622 WNT8BQ93098 351 aa28.41■■■□□ 2.14
LSM7-201ENST00000252622 UIMC1Q96RL1 719 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms