RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 TMCO5BA8MYB1 307 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 ZBTB48P10074 688 aaPredicted RBP15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 GNA11P29992 359 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 TBCKQ8TEA7 893 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 RAD54LQ92698 747 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 C6orf50Q9HD87 102 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 CNOT8Q9UFF9 292 aaKnown RBP15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 ADAMTS1Q9UHI8 967 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 ATAD5Q96QE3 1844 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 SMCO2A6NFE2 343 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 TMOD1P28289 359 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 TXKP42681 527 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 LRRC41Q15345 812 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 TAX1BP1Q86VP1 789 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 DDX12PQ92771 950 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 P3H4Q92791 437 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 TATDN2Q93075 761 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 MYH4Q9Y623 1939 aa15.33■□□□□ 0.05
SCNN1A-201ENST00000228916 MARSP56192 900 aaKnown RBP15.33■□□□□ 0.05
SCNN1A-201ENST00000228916 KLHL30Q0D2K2 578 aa15.33■□□□□ 0.05
SCNN1A-201ENST00000228916 MTMR3Q13615 1198 aa15.33■□□□□ 0.05
SCNN1A-201ENST00000228916 DDX42Q86XP3 938 aaKnown RBP eCLIP15.33■□□□□ 0.05
SCNN1A-201ENST00000228916 MYOCDQ8IZQ8 938 aa15.33■□□□□ 0.05
SCNN1A-201ENST00000228916 RAPGEF5Q92565 580 aa15.33■□□□□ 0.05
SCNN1A-201ENST00000228916 CPVLQ9H3G5 476 aa15.33■□□□□ 0.05
SCNN1A-201ENST00000228916 ROBO3Q96MS0 1386 aa15.33■□□□□ 0.04
SCNN1A-201ENST00000228916 SART1O43290 800 aaKnown RBP15.33■□□□□ 0.04
SCNN1A-201ENST00000228916 XRCC4Q13426 336 aa15.33■□□□□ 0.04
SCNN1A-201ENST00000228916 TRIM59Q8IWR1 403 aa15.33■□□□□ 0.04
SCNN1A-201ENST00000228916 CACNA2D3Q8IZS8 1091 aa15.33■□□□□ 0.04
SCNN1A-201ENST00000228916 LRRC57Q8N9N7 239 aa15.33■□□□□ 0.04
SCNN1A-201ENST00000228916 CEP63Q96MT8 703 aa15.33■□□□□ 0.04
SCNN1A-201ENST00000228916 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.33■□□□□ 0.04
SCNN1A-201ENST00000228916 FBXL5Q9UKA1 691 aa15.33■□□□□ 0.04
SCNN1A-201ENST00000228916 MAST2Q6P0Q8 1798 aa15.33■□□□□ 0.04
SCNN1A-201ENST00000228916 KLRF2D3W0D1 207 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 GOLGA8HP0CJ92 632 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 SCTRP47872 440 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 RAPGEF1Q13905 1077 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 C10orf76Q5T2E6 689 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 CDK5RAP3Q96JB5 506 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 TMEM47Q9BQJ4 181 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 LRRC27Q9C0I9 530 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 HAUS2Q9NVX0 235 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 ODF2LQ9ULJ1 636 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 TMEM119Q4V9L6 283 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 TXNRD3Q86VQ6 643 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 FAM133AQ8N9E0 248 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 GANQ9H2C0 597 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 TPX2Q9ULW0 747 aaKnown RBP15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 ZNF335Q9H4Z2 1342 aaPredicted RBP15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 TRAF5O00463 557 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 PDHBP11177 359 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 HIBADHP31937 336 aaKnown RBP15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 NF2P35240 595 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 FLT3P36888 993 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 ASIC2Q16515 512 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 CALCRLQ16602 461 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 KCNK18Q7Z418 384 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 SEC14L1Q92503 715 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 CCT6BQ92526 530 aa15.32■□□□□ 0.04
SCNN1A-201ENST00000228916 CCDC188H7C350 402 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 PGRMC1O00264 195 aaKnown RBP15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 CEP104O60308 925 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 GNA14O95837 355 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 GHRP10912 638 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 MRPL12P52815 198 aaKnown RBP15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 DNAJC19Q96DA6 116 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 NOVA2Q9UNW9 492 aaKnown RBP15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 ARID5AQ03989 594 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 COASYQ13057 564 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 PDIA5Q14554 519 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 ODF2Q5BJF6 829 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 BICDL1Q6ZP65 573 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 PAXIP1Q6ZW49 1069 aaPredicted RBP15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 TMC3Q7Z5M5 1100 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 SLC44A5Q8NCS7 719 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 UBLCP1Q8WVY7 318 aaPredicted RBP15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 NUDT12Q9BQG2 462 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 KDM4CQ9H3R0 1056 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 ZNF652Q9Y2D9 606 aa15.31■□□□□ 0.04
SCNN1A-201ENST00000228916 DCDC2CA8MYV0 355 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 DNAJC8O75937 253 aaPredicted RBP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 DRD4P21917 467 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 IFFO1Q0D2I5 559 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 GKAP1Q5VSY0 366 aaPredicted RBP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 N4BP2L2Q92802 583 aaPredicted RBP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 AP1M1Q9BXS5 423 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 MKNK2Q9HBH9 465 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 BCCIPQ9P287 314 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 NOC2LQ9Y3T9 749 aaKnown RBP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 WNK3Q9BYP7 1800 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 MYH7BA7E2Y1 1941 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 MAGOHP61326 146 aaKnown RBP15.3■□□□□ 0.04
SCNN1A-201ENST00000228916 SEPT2Q15019 361 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms