RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 MBOAT7Q96N66 472 aa18.57■□□□□ 0.56
LIM2-201ENST00000221973 CDX2Q99626 313 aaPredicted RBP18.57■□□□□ 0.56
LIM2-201ENST00000221973 FTOQ9C0B1 505 aaKnown RBP eCLIP18.57■□□□□ 0.56
LIM2-201ENST00000221973 PKD2L1Q9P0L9 805 aa18.57■□□□□ 0.56
LIM2-201ENST00000221973 TFIP11Q9UBB9 837 aaKnown RBP18.57■□□□□ 0.56
LIM2-201ENST00000221973 A0A0U1RQG5 324 aaPredicted RBP18.56■□□□□ 0.56
LIM2-201ENST00000221973 FIBPO43427 364 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 NEMFO60524 1076 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 SMPD1P17405 629 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 SETQ01105 290 aaPredicted RBP18.56■□□□□ 0.56
LIM2-201ENST00000221973 SEMA3FQ13275 785 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 FAM126BQ8IXS8 530 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 LENG9Q96B70 501 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 CHAMP1Q96JM3 812 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 RNPC3Q96LT9 517 aaKnown RBP18.56■□□□□ 0.56
LIM2-201ENST00000221973 ZNF396Q96N95 335 aaPredicted RBP18.56■□□□□ 0.56
LIM2-201ENST00000221973 USP28Q96RU2 1077 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 SPC25Q9HBM1 224 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.56■□□□□ 0.56
LIM2-201ENST00000221973 KCNH7Q9NS40 1196 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 ATP6V1DQ9Y5K8 247 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 CLIC4Q9Y696 253 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 MRVI1Q9Y6F6 885 aa18.56■□□□□ 0.56
LIM2-201ENST00000221973 GRIN2DO15399 1336 aa18.55■□□□□ 0.56
LIM2-201ENST00000221973 SPATA31C2B4DYI2 1134 aa18.55■□□□□ 0.56
LIM2-201ENST00000221973 CD4P01730 458 aa18.55■□□□□ 0.56
LIM2-201ENST00000221973 ICAM3P32942 547 aa18.55■□□□□ 0.56
LIM2-201ENST00000221973 DNM1Q05193 864 aaKnown RBP18.55■□□□□ 0.56
LIM2-201ENST00000221973 SF3A1Q15459 793 aaKnown RBP18.55■□□□□ 0.56
LIM2-201ENST00000221973 MFSD5Q6N075 450 aa18.55■□□□□ 0.56
LIM2-201ENST00000221973 TLK2Q86UE8 772 aa18.55■□□□□ 0.56
LIM2-201ENST00000221973 SCFD2Q8WU76 684 aa18.55■□□□□ 0.56
LIM2-201ENST00000221973 CDHR1Q96JP9 859 aa18.55■□□□□ 0.56
LIM2-201ENST00000221973 TMEM60Q9H2L4 133 aa18.55■□□□□ 0.56
LIM2-201ENST00000221973 AGO4Q9HCK5 861 aaKnown RBP18.55■□□□□ 0.56
LIM2-201ENST00000221973 MROH7Q68CQ1 1323 aa18.54■□□□□ 0.56
LIM2-201ENST00000221973 RBM47A0AV96 593 aaKnown RBP18.54■□□□□ 0.56
LIM2-201ENST00000221973 MSH4O15457 936 aa18.54■□□□□ 0.56
LIM2-201ENST00000221973 MARCH6O60337 910 aa18.54■□□□□ 0.56
LIM2-201ENST00000221973 ARIH2O95376 493 aa18.54■□□□□ 0.56
LIM2-201ENST00000221973 TXNP10599 105 aaKnown RBP18.54■□□□□ 0.56
LIM2-201ENST00000221973 ORC2Q13416 577 aaPredicted RBP18.54■□□□□ 0.56
LIM2-201ENST00000221973 TTLL4Q14679 1199 aa18.54■□□□□ 0.56
LIM2-201ENST00000221973 CALCRLQ16602 461 aa18.54■□□□□ 0.56
LIM2-201ENST00000221973 LY6KQ17RY6 165 aa18.54■□□□□ 0.56
LIM2-201ENST00000221973 CXCL17Q6UXB2 119 aa18.54■□□□□ 0.56
LIM2-201ENST00000221973 GJA10Q969M2 543 aa18.54■□□□□ 0.56
LIM2-201ENST00000221973 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.54■□□□□ 0.56
LIM2-201ENST00000221973 ZNF577Q9BSK1 485 aa18.54■□□□□ 0.56
LIM2-201ENST00000221973 MAFGO15525 162 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 SORBS3O60504 671 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 ATP9AO75110 1047 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 NCLP19338 710 aaKnown RBP18.53■□□□□ 0.56
LIM2-201ENST00000221973 PTGDRQ13258 359 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 FSCN1Q16658 493 aaKnown RBP18.53■□□□□ 0.56
LIM2-201ENST00000221973 RASIP1Q5U651 963 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 IQSEC1Q6DN90 963 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 CCDC62Q6P9F0 684 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 KCNV1Q6PIU1 500 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 ETNPPLQ8TBG4 499 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 VTI1AQ96AJ9 217 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 KCNMB3Q9NPA1 279 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 DDX41Q9UJV9 622 aaKnown RBP18.53■□□□□ 0.56
LIM2-201ENST00000221973 CEP131Q9UPN4 1083 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 MYH7BA7E2Y1 1941 aa18.53■□□□□ 0.56
LIM2-201ENST00000221973 CHD7Q9P2D1 2997 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 IPO5O00410 1097 aaKnown RBP18.52■□□□□ 0.56
LIM2-201ENST00000221973 DYNC1LI2O43237 492 aaPredicted RBP18.52■□□□□ 0.56
LIM2-201ENST00000221973 OR52Z1P0C646 297 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 TGFB3P10600 412 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 CSF2RAP15509 400 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 UBA1P22314 1058 aaKnown RBP18.52■□□□□ 0.56
LIM2-201ENST00000221973 SP2Q02086 613 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 TMEM240Q5SV17 173 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 C4orf32Q8N8J7 132 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 MYLIPQ8WY64 445 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 HAS1Q92839 578 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 COPS5Q92905 334 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 TNPO1Q92973 898 aaKnown RBP18.52■□□□□ 0.56
LIM2-201ENST00000221973 BCAS3Q9H6U6 928 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 Q9Y3F1 56 aa18.52■□□□□ 0.56
LIM2-201ENST00000221973 DDX39AO00148 427 aaKnown RBP18.51■□□□□ 0.55
LIM2-201ENST00000221973 TBX3O15119 743 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 BAG4O95429 457 aaKnown RBP18.51■□□□□ 0.55
LIM2-201ENST00000221973 KCNA2P16389 499 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 TXKP42681 527 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 KRT85P78386 507 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 ITGB3BPQ13352 177 aaPredicted RBP18.51■□□□□ 0.55
LIM2-201ENST00000221973 PTPAQ15257 358 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 LRCH2Q5VUJ6 765 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 ATL3Q6DD88 541 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.51■□□□□ 0.55
LIM2-201ENST00000221973 SLC5A5Q92911 643 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 FAM20AQ96MK3 541 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 MTMR9Q96QG7 549 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 POLR3EQ9NVU0 708 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 CFAP45Q9UL16 551 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 MUC3AQ02505 3323 aa18.51■□□□□ 0.55
LIM2-201ENST00000221973 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.5■□□□□ 0.55
LIM2-201ENST00000221973 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms