RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 SLC9A1P19634 815 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 NR2F2P24468 414 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 HNRNPH3P31942 346 aaKnown RBP16.13■□□□□ 0.17
CNOT3-201ENST00000221232 GGCXP38435 758 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 SLC9C1Q4G0N8 1177 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 DCAF17Q5H9S7 520 aaPredicted RBP16.13■□□□□ 0.17
CNOT3-201ENST00000221232 FOXR1Q6PIV2 292 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 SND1Q7KZF4 910 aaKnown RBP eCLIP16.13■□□□□ 0.17
CNOT3-201ENST00000221232 COL23A1Q86Y22 540 aaPredicted RBP16.13■□□□□ 0.17
CNOT3-201ENST00000221232 ALS2CR12Q96Q35 445 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 SELENOOQ9BVL4 669 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 NT5C3AQ9H0P0 336 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 RABEP2Q9H5N1 569 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 FAM198AQ9UFP1 575 aa16.13■□□□□ 0.17
CNOT3-201ENST00000221232 ZBTB39O15060 712 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 CHMP2AO43633 222 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 ZNF76P36508 570 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 KCNA1Q09470 495 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 PROCA1Q8NCQ7 364 aaPredicted RBP16.12■□□□□ 0.17
CNOT3-201ENST00000221232 PIGOQ8TEQ8 1089 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 EXOC4Q96A65 974 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 HPCAL4Q9UM19 191 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 ANO9A1A5B4 782 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 SYF2O95926 243 aaKnown RBP16.12■□□□□ 0.17
CNOT3-201ENST00000221232 MYBP10242 640 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 KCNH2Q12809 1159 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 ZNF662Q6ZS27 426 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 SFR1Q86XK3 245 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 PCDHA2Q9Y5H9 948 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 PLIN4Q96Q06 1357 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 A0A087X0T9 212 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 PALMO75781 387 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 FAM228BP0C875 321 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 KLRC1P26715 233 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 PPARDQ03181 441 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 KSR1Q8IVT5 923 aa16.12■□□□□ 0.17
CNOT3-201ENST00000221232 DHX36Q9H2U1 1008 aaKnown RBP16.12■□□□□ 0.17
CNOT3-201ENST00000221232 CDK5RAP2Q96SN8 1893 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 ESYT3A0FGR9 886 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 SPDYE3A6NKU9 549 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 GH2P01242 217 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 GCFC2P16383 781 aaKnown RBP16.11■□□□□ 0.17
CNOT3-201ENST00000221232 KLHL30Q0D2K2 578 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 KIAA0753Q2KHM9 967 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 KLHDC7AQ5VTJ3 777 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 PPP1R18Q6NYC8 613 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 HHIPL2Q6UWX4 724 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 NOX5Q96PH1 765 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 REEP2Q9BRK0 252 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 TLR10Q9BXR5 811 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 BHMT2Q9H2M3 363 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 RBM12Q9NTZ6 932 aaKnown RBP16.11■□□□□ 0.17
CNOT3-201ENST00000221232 PI4KBQ9UBF8 816 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 ZNF831Q5JPB2 1677 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 UTRNP46939 3433 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 NDUFB10O96000 172 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 NPR1P16066 1061 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 SLC12A3P55017 1021 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 ZYXQ15942 572 aaKnown RBP16.11■□□□□ 0.17
CNOT3-201ENST00000221232 MAP9Q49MG5 647 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 TRMT1LQ7Z2T5 733 aaKnown RBP16.11■□□□□ 0.17
CNOT3-201ENST00000221232 FBXO11Q86XK2 927 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 KCTD10Q9H3F6 313 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 KCNMB3Q9NPA1 279 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.11■□□□□ 0.17
CNOT3-201ENST00000221232 DNM3Q9UQ16 869 aa16.11■□□□□ 0.17
CNOT3-201ENST00000221232 MYH10P35580 1976 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 ZSCAN5CA6NGD5 496 aaPredicted RBP16.1■□□□□ 0.17
CNOT3-201ENST00000221232 ANKRD65E5RJM6 399 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 CETN3O15182 167 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 POLD1P28340 1107 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 CTTNQ14247 550 aaKnown RBP16.1■□□□□ 0.17
CNOT3-201ENST00000221232 ASTE1Q2TB18 679 aaPredicted RBP16.1■□□□□ 0.17
CNOT3-201ENST00000221232 DNAJC21Q5F1R6 531 aaKnown RBP16.1■□□□□ 0.17
CNOT3-201ENST00000221232 CCDC17Q96LX7 622 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 ACBD3Q9H3P7 528 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 CEP72Q9P209 647 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 HYOU1Q9Y4L1 999 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 PCDHB13Q9Y5F0 798 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 KDM3AQ9Y4C1 1321 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 KLRG2A4D1S0 409 aaPredicted RBP16.1■□□□□ 0.17
CNOT3-201ENST00000221232 PAFAH1B1P43034 410 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 CASP4P49662 377 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 GIT2Q14161 759 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 RRP1BQ14684 758 aaKnown RBP16.1■□□□□ 0.17
CNOT3-201ENST00000221232 ABCB5Q2M3G0 1257 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 CCDC70Q6NSX1 233 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 GJB7Q6PEY0 223 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 TRIM59Q8IWR1 403 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 FAM71BQ8TC56 605 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 IFT81Q8WYA0 676 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 AMNQ9BXJ7 453 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 HDAC9Q9UKV0 1011 aa16.1■□□□□ 0.17
CNOT3-201ENST00000221232 TUBBP07437 444 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 SPATA31C1P0DKV0 1188 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 USP11P51784 963 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 TRPC5Q9UL62 973 aaPredicted RBP16.09■□□□□ 0.17
CNOT3-201ENST00000221232 SUGT1Q9Y2Z0 365 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 EML1O00423 815 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 GCNT3O95395 438 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms