RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 BAG6P46379 1132 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 STAT2P52630 851 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 FAM133AQ8N9E0 248 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 SEC16BQ96JE7 1060 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 PGBD1Q96JS3 809 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 BPIFA3Q9BQP9 254 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 PANK4Q9NVE7 773 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 SNX24Q9Y343 169 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 ORC6Q9Y5N6 252 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 ZFYVE16Q7Z3T8 1539 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 SMCO2A6NFE2 343 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 NVLO15381 856 aaKnown RBP11.25□□□□□ -0.61
VCL-201ENST00000211998 GSTA1P08263 222 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 GSTA2P09210 222 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 GPBP1Q86WP2 473 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 MB21D1Q8N884 522 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 EHD2Q9NZN4 543 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 STAP2Q9UGK3 403 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 SGK1O00141 431 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 PCCAP05165 728 aaPredicted RBP11.25□□□□□ -0.61
VCL-201ENST00000211998 SAT1P21673 171 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 PMS1P54277 932 aaKnown RBP11.25□□□□□ -0.61
VCL-201ENST00000211998 MFSD14BQ5SR56 506 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 RASSF3Q86WH2 238 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 ZSCAN10Q96SZ4 725 aaPredicted RBP11.25□□□□□ -0.61
VCL-201ENST00000211998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.25□□□□□ -0.61
VCL-201ENST00000211998 FHOD1Q9Y613 1164 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 GAS7O60861 476 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 LSP1P33241 339 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 GARSP41250 739 aaKnown RBP11.25□□□□□ -0.61
VCL-201ENST00000211998 NOP14P78316 857 aaKnown RBP11.25□□□□□ -0.61
VCL-201ENST00000211998 TCP10Q12799 353 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 MAN2A1Q16706 1144 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 DCAF15Q66K64 600 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 EPM2AIP1Q7L775 607 aaPredicted RBP11.25□□□□□ -0.61
VCL-201ENST00000211998 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
VCL-201ENST00000211998 DTX3LQ8TDB6 740 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 THAP11Q96EK4 314 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 HIC2Q96JB3 615 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 DCTN4Q9UJW0 460 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 SKAP2O75563 359 aaPredicted RBP11.25□□□□□ -0.61
VCL-201ENST00000211998 PALMO75781 387 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 FGGP02679 453 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 GNAT1P11488 350 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 PMS2P54278 862 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 KIF23Q02241 960 aaPredicted RBP11.25□□□□□ -0.61
VCL-201ENST00000211998 EP400NLQ6ZTU2 488 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 SLFN12Q8IYM2 578 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 ZNF408Q9H9D4 720 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 TBC1D23Q9NUY8 699 aa11.25□□□□□ -0.61
VCL-201ENST00000211998 DBNLQ9UJU6 430 aaKnown RBP11.25□□□□□ -0.61
VCL-201ENST00000211998 DYTNA2CJ06 578 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 PHF20L1A8MW92 1017 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 RASA4BC9J798 803 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 RASA4O43374 803 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 PRPF6O94906 941 aaKnown RBP11.24□□□□□ -0.61
VCL-201ENST00000211998 SERPING1P05155 500 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 KCNA4P22459 653 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 ATG16L1Q676U5 607 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 NFRKBQ6P4R8 1299 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 POLD4Q9HCU8 107 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 MRPL11Q9Y3B7 192 aaKnown RBP11.24□□□□□ -0.61
VCL-201ENST00000211998 CSADQ9Y600 493 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 DDAH1O94760 285 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 SYF2O95926 243 aaKnown RBP11.24□□□□□ -0.61
VCL-201ENST00000211998 HSPD1P10809 573 aaKnown RBP11.24□□□□□ -0.61
VCL-201ENST00000211998 EPHB1P54762 984 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 SRRM1Q8IYB3 904 aaKnown RBP11.24□□□□□ -0.61
VCL-201ENST00000211998 CDKL2Q92772 493 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 SGSM3Q96HU1 749 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 HAUS7Q99871 368 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 ZNF229Q9UJW7 825 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 ABCA5Q8WWZ7 1642 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 CD19P15391 556 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 PAPOLAP51003 745 aaKnown RBP11.24□□□□□ -0.61
VCL-201ENST00000211998 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 BLIDQ8IZY5 108 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 SPDYE1Q8NFV5 336 aaPredicted RBP11.24□□□□□ -0.61
VCL-201ENST00000211998 POLR3CQ9BUI4 534 aaPredicted RBP11.24□□□□□ -0.61
VCL-201ENST00000211998 THAP9Q9H5L6 903 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 ATP1A1P05023 1023 aaKnown RBP11.24□□□□□ -0.61
VCL-201ENST00000211998 CASP2P42575 452 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 TTBK2Q6IQ55 1244 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 CYFIP2Q96F07 1278 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 GOLPH3LQ9H4A5 285 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 TAF1DQ9H5J8 278 aaPredicted RBP11.24□□□□□ -0.61
VCL-201ENST00000211998 DISP1Q96F81 1524 aa11.24□□□□□ -0.61
VCL-201ENST00000211998 DAB1O75553 588 aa11.23□□□□□ -0.61
VCL-201ENST00000211998 APBA3O96018 575 aa11.23□□□□□ -0.61
VCL-201ENST00000211998 STX1BP61266 288 aa11.23□□□□□ -0.61
VCL-201ENST00000211998 GTF2IP78347 998 aa11.23□□□□□ -0.61
VCL-201ENST00000211998 PABPC4Q13310 644 aaKnown RBP eCLIP11.23□□□□□ -0.612e-10■■□□□ 13.9
VCL-201ENST00000211998 MED21Q13503 144 aa11.23□□□□□ -0.61
VCL-201ENST00000211998 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.23□□□□□ -0.61
VCL-201ENST00000211998 DEPTORQ8TB45 409 aa11.23□□□□□ -0.61
VCL-201ENST00000211998 SLC26A7Q8TE54 656 aa11.23□□□□□ -0.61
VCL-201ENST00000211998 MLXIPQ9HAP2 919 aa11.23□□□□□ -0.61
VCL-201ENST00000211998 METTL14Q9HCE5 456 aaKnown RBP11.23□□□□□ -0.61
VCL-201ENST00000211998 CHMP2BQ9UQN3 213 aa11.23□□□□□ -0.61
VCL-201ENST00000211998 CFAP69A5D8W1 941 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms