RNA–Protein interactions for RNA: ENSMUST00000110302.7

Clcn3-205, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

TSL 5 BASIC

Gene Clcn3, Length 3,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-205ENSMUST00000110302 Hoxc10P31257 342 aa9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 TfrcQ62351 763 aaKnown RBP9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Tmem130Q6NXM3 419 aa9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Trak2Q6P9N8 913 aa9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Jade2Q6ZQF7 829 aa9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Btnl9Q8BJE2 536 aa9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 GanQ8CA72 597 aa9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Sgms1Q8VCQ6 419 aa9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Lpin2Q99PI5 893 aa9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Ribc1Q9D0B8 379 aa9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Fsip1Q9D3V5 435 aa9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Tbx18Q9EPZ6 613 aa9.35□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Zfp984A2A7A2 547 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Lig1P37913 916 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Gpatch11Q3UFS4 262 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Znf354cQ571J5 560 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Ovgp1Q62010 721 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Trpv1Q704Y3 839 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Tbc1d22bQ80VE5 505 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Ankrd24Q80VM7 985 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 BbxQ8VBW5 907 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Apopt1Q9CQW7 192 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Ears2Q9CXJ1 523 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Stk32bQ9JJX8 414 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Mrvi1Q9WUX5 899 aaKnown RBP9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Fndc3c1Q6DFV6 1356 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Lrrc38A2VDH3 298 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Magea4F2Z493 315 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Eif3dO70194 548 aaKnown RBP9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Tpp1O89023 562 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Lamp1P11438 406 aaKnown RBP9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Eps15P42567 897 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Vwa3aQ3UVV9 1148 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 E2f7Q6S7F2 904 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Cyp26b1Q811W2 512 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Serpinb13Q8CDC0 389 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Ano2Q8CFW1 1002 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Lrrc41Q8K1C9 807 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Bco2Q99NF1 532 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 AmfrQ9R049 643 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Trip11E9Q512 1976 aa9.34□□□□□ -0.91
Clcn3-205ENSMUST00000110302 Pik3r1P26450 724 aa9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Dnm2P39054 870 aaKnown RBP9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Akr1b1P45376 316 aa9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Kcna2P63141 499 aa9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Taf1bP97358 586 aa9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Ap5z1Q3U829 807 aa9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Cnksr2Q80YA9 1032 aa9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Atg4cQ811C2 458 aa9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Stap2Q8R0L1 411 aa9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Gnl2Q99LH1 728 aaKnown RBP9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 SelenooQ9DBC0 667 aa9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Extl3Q9WVL6 918 aa9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Uso1Q9Z1Z0 959 aaKnown RBP9.34□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Myo5aQ99104 1853 aaKnown RBP9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Ttll10A4Q9F3 704 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 AunipE9Q6Z5 340 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Vmn2r78K7N6U5 853 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Atp9aO70228 1047 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 SfnO70456 248 aaKnown RBP9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 MyocO70624 490 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Abhd15Q5F2F2 459 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Tgoln2Q62314 363 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Secisbp2lQ6A098 1086 aaKnown RBP9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Bbs7Q8K2G4 715 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Cacnb1Q8R3Z5 597 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Pcdhb12Q91Y07 789 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Traf7Q922B6 594 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Gtf2a1Q99PM3 378 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Tubb4aQ9D6F9 444 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Nup210lQ9D2F7 1881 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Cntnap2Q9CPW0 1332 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Hnrnph3D3Z3N4 346 aaKnown RBP9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Wdr78E9PYY5 807 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Gm10378F6XQQ1 160 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Pip4k2aO70172 405 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Magea8O89012 320 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Fgfr4Q03142 799 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Gse1Q3U3C9 1213 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Adgre1Q61549 931 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Mcm7Q61881 719 aaKnown RBP9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Tll1Q62381 1013 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Herc4Q6PAV2 1057 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Dnph1Q80VJ3 173 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Pgm5Q8BZF8 567 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Ccdc113Q8C5T8 377 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Pym1Q8CHP5 203 aaKnown RBP9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Gm45140A0A0N4SUM8 220 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Gm38392E9Q2A2 434 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Usp17leQ7M764 540 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Ppp2r2cQ8BG02 447 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Rps6ka5Q8C050 863 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Adcy3Q8VHH7 1145 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Eef1gQ9D8N0 437 aaKnown RBP9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Rbp7Q9EPC5 134 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Irx4Q9QY61 515 aa9.33□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Pou2f2Q00196 463 aa9.32□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Lmntd2Q0VET5 664 aa9.32□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Smyd5Q3TYX3 416 aa9.32□□□□□ -0.92
Clcn3-205ENSMUST00000110302 Agxt2Q3UEG6 513 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms