RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Smarce1O54941 411 aaKnown RBP13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Il2rbP16297 539 aa13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Art2aP17981 287 aa13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Ppp4r2Q0VGB7 417 aa13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Psg29Q3URN6 468 aa13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Fam214aQ69ZK7 1075 aa13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Tcaf3Q6QR59 914 aa13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Nap1l4Q78ZA7 375 aaKnown RBP13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Zbed4Q80WQ9 1168 aa13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Ca12Q8CI85 354 aa13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Trpv6Q91WD2 767 aa13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Dnajc19Q9CQV7 116 aa13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Hip1rQ9JKY5 1068 aa13.76□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Cpb1B2RS76 415 aa13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 U2af2P26369 475 aaKnown RBP13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Stk11ipQ3TAA7 1072 aa13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Gm3414Q3TNU4 584 aa13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Eif3j1Q3UGC7 261 aaKnown RBP13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Ppp2r5cQ60996 524 aa13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Cyp4x1Q6A152 507 aa13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Tmem202Q80W35 275 aa13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Neu4Q8BZL1 478 aa13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Spred2Q924S7 410 aa13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Fmnl1Q9JL26 1094 aa13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Mad1l1Q9WTX8 717 aaKnown RBP13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 TrioQ0KL02 3102 aa13.75□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Baz2aQ91YE5 1889 aaKnown RBP13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Slc23a4A0A0J9YUX7 615 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Malrd1A2AJX4 2123 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Fam124aD3Z5V4 536 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Pcdha4O88689 947 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Gjb4Q02738 266 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Lrrc55Q3UY51 311 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Kif5bQ61768 963 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Ahcyl2Q68FL4 613 aaKnown RBP13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Lrrcc1Q69ZB0 1026 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Cnnm4Q69ZF7 771 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Krt87Q6IMF0 495 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Ssh1Q76I79 1042 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 F13a1Q8BH61 732 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Iffo2Q8R2V2 512 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Tbc1d13Q8R3D1 400 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Plcb4Q91UZ1 1175 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Terf2ipQ91VL8 393 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Prmt7Q922X9 692 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Clp1Q99LI9 425 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Fbxo16Q9QZM9 334 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 BcamQ9R069 622 aa13.74□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Map7d1A2AJI0 846 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Gm12800B1AUV4 484 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Gm3095E9Q058 166 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Zfr2E9Q5M4 874 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 R3hdm1E9Q9Q2 1135 aaKnown RBP13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Gm12794L7MTS5 483 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Diaph1O08808 1255 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 CebpaP53566 359 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 P3h1Q3V1T4 739 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Kcnj11Q61743 390 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Tgoln2Q62314 363 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 PicalmQ7M6Y3 660 aaKnown RBP13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Zbtb5Q7TQG0 670 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Suz12Q80U70 741 aaKnown RBP13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Pi4kbQ8BKC8 816 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 PisdQ8BSF4 406 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 N4bp3Q8C7U1 537 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 CnstQ8CBC4 711 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Grin3bQ91ZU9 1003 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Med24Q99K74 987 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Atp6ap2Q9CYN9 350 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Krt34Q9D646 392 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Slc5a4aQ9ET37 656 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Gys1Q9Z1E4 738 aaKnown RBP13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Cdh23Q99PF4 3354 aa13.73□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Lrrc32G3XA59 663 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Scp2P32020 547 aaKnown RBP13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Dnm1P39053 867 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Lmntd2Q0VET5 664 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Trappc10Q3TLI0 1259 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Dph1Q5NCQ5 438 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 FcgrtQ61559 365 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Ccdc189Q6NZQ0 333 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Gtf2a2Q80ZM7 109 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Fbxo44Q8BK26 255 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 MylipQ8BM54 445 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Me3Q8BMF3 604 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Grik4Q8BMF5 956 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Dennd2aQ8C4S8 1000 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Usp20Q8C6M1 916 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Agbl3Q8CDP0 1006 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 VasnQ9CZT5 673 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Chmp4cQ9D7F7 232 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Mettl7bQ9DD20 244 aa13.72□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Igkv10-96A0A140T8M1 115 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Tbkbp1A2A9T0 611 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Cdc6O89033 562 aaKnown RBP13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Mtco1P00397 514 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 P04214 136 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Wnt7aP24383 349 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Pcif1P59114 706 aa13.71□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 DSCC1Q14AI0 399 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms