RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Snrnp35Q9D384 244 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Lrrc32G3XA59 663 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Akr1b10G5E895 316 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Prpf38aQ4FK66 312 aaKnown RBP12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 UrgcpQ5NCI0 926 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ncoa3O09000 1398 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Setd1bQ8CFT2 1985 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 A0A286YCQ6 122 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Krt10P02535 570 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Pdha1P35486 390 aaKnown RBP12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Kbtbd3Q8BHI4 607 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ints9Q8K114 658 aaKnown RBP12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Trpd52l3Q9CQ14 231 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Zfp651E9PZ11 729 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Inpp1P49442 396 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ces1fQ91WU0 561 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ccdc77Q9CZH8 489 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 CoasyQ9DBL7 563 aa12.81□□□□□ -0.36
Trim56-201ENSMUST00000054384 Rps8P62242 208 aaKnown RBP12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Lrch2Q3UMG5 773 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Baiap3Q80TT2 1134 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Tbc1d19Q8VDV7 526 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 AmotQ8VHG2 1126 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 HnmtQ91VF2 295 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 HibadhQ99L13 335 aaKnown RBP12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Snx5Q9D8U8 404 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Il2P04351 169 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 P4hbP09103 509 aaKnown RBP12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Mdh1P14152 334 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Zfp956Q3UZY6 572 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Map3k10Q66L42 940 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Znf507Q6ZPY5 941 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Phf20l1Q8CCJ9 1013 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Myo1eE9Q634 1107 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 GnptabQ69ZN6 1235 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Washc5Q8C2E7 1159 aaKnown RBP12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ephb1Q8CBF3 984 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Trpv6Q91WD2 767 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Maged2Q9ER67 616 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Plekhg4A0A1L1SU27 1217 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Adam1aQ60813 791 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 AlcamQ61490 583 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ddx19bQ8BZY3 494 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 1700016D06RikQ9DAA5 166 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Trim54Q9ERP3 366 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Arhgap44Q5SSM3 814 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ppp1r2Q9DCL8 206 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Adgrl2Q8JZZ7 1487 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Gm28042B7ZCM9 1014 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Kifc3O35231 824 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Pbxip1Q3TVI8 727 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Sept10Q8C650 452 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Psmd2Q8VDM4 908 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 HnrnprQ8VHM5 632 aaKnown RBP12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Foxp3Q99JB6 429 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Cox16Q9CR63 106 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Adarb2Q9JI20 745 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Rlbp1Q9Z275 317 aa12.8□□□□□ -0.36
Trim56-201ENSMUST00000054384 Upf3bQ3ULL6 472 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Acbd5Q5XG73 508 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Naa30Q8CES0 364 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Tcof1O08784 1320 aaKnown RBP12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Asic4Q7TNS7 539 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Fads3Q9JJE7 449 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Lipo1J3QME6 396 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Lig1P37913 916 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 CpQ61147 1061 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Dnaaf2Q8BPI1 814 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Cdca7lQ922M5 438 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Myh10Q61879 1976 aaKnown RBP12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Clcn6O35454 870 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 DnttP09838 530 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Stkld1Q80YS9 662 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Armc6Q8BNU0 468 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Rfx6Q8C7R7 927 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Stxbp5Q8K400 1152 aaKnown RBP12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Serpinb3bQ9D1Q5 387 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Ccdc103Q9D9P2 237 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Dnajc7Q9QYI3 494 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Tnni1Q9WUZ5 187 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Pou5f1P20263 352 aaKnown RBP12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Trim35Q8C006 501 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Kcng1A2BDX4 514 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Vwa3bJ9JI28 736 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Arl4cP61208 192 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Olfm3P63056 478 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Kctd1Q5M956 257 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Vav2Q60992 868 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Nek9Q8K1R7 984 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Rpap2Q8VC34 614 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Nphp4P59240 1425 aa12.79□□□□□ -0.36
Trim56-201ENSMUST00000054384 Drp2Q05AA6 957 aa12.78□□□□□ -0.36
Trim56-201ENSMUST00000054384 Psma8Q9CWH6 250 aa12.78□□□□□ -0.36
Trim56-201ENSMUST00000054384 A0A1Y7VML8 143 aa12.78□□□□□ -0.36
Trim56-201ENSMUST00000054384 Sept8Q8CHH9 429 aa12.78□□□□□ -0.36
Trim56-201ENSMUST00000054384 Gpaa1Q9WTK3 621 aa12.78□□□□□ -0.36
Trim56-201ENSMUST00000054384 Kcna1P16388 495 aa12.78□□□□□ -0.36
Trim56-201ENSMUST00000054384 Nr1h4Q60641 488 aa12.78□□□□□ -0.36
Trim56-201ENSMUST00000054384 Tbc1d1Q60949 1255 aa12.78□□□□□ -0.36
Trim56-201ENSMUST00000054384 Krt34Q9D646 392 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms