RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Hdac10Q6P3E7 666 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 PigsQ6PD26 555 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Rhbdf1Q6PIX5 856 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Naa15Q80UM3 865 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Znrd1-asQ8R0E5 213 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Psmd2Q8VDM4 908 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Dhx58Q99J87 678 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Abcf2Q99LE6 628 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Rexo2Q9D8S4 237 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Pex11aQ9Z211 246 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Cpsf2O35218 782 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Polr2fP61219 127 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Tspyl3Q3UYP3 334 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Asap3Q5U464 904 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Cd37Q61470 281 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Rassf2Q8BMS9 326 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Mzb1Q9D8I1 188 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Slc40a1Q9JHI9 570 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Usp14Q9JMA1 493 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Pacsin2Q9WVE8 486 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gdf11Q9Z1W4 405 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Heg1E9Q7X6 1337 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Clcn6O35454 870 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Cetn3O35648 167 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Pgrmc1O55022 195 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Serpinc1P32261 465 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Psmc2P46471 433 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Opa1P58281 960 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Nhej1Q3KNJ2 295 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Kctd16Q5DTY9 427 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Anks6Q6GQX6 883 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Usp38Q8BW70 1042 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Eif3hQ91WK2 352 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Mettl13Q91YR5 698 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Slc5a4bQ91ZP4 660 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Rfc4Q99J62 364 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Sf3a3Q9D554 501 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 SetQ9EQU5 289 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Znf704Q9ERQ3 566 aa10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Prpf40aQ9R1C7 953 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Dnaaf5B9EJR8 853 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Zfp174B9EJW5 407 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Tnnc1P19123 161 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ctnnd1P30999 938 aaKnown RBP10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Muc3aQ3U5A2 218 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Erlin2Q8BFZ9 340 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Bcas3Q8CCN5 928 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Zkscan3Q91VW9 553 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Lrp2bpQ9D4C6 346 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Calr3Q9D9Q6 380 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Inpp4aQ9EPW0 939 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ankrd2Q9WV06 328 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Sept3Q9Z1S5 350 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 A0A286YCQ6 122 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Xirp1O70373 1129 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Cacna2d4Q5RJF7 1116 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 KaznQ69ZS8 779 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Krt9Q6RHW0 743 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Scyl2Q8CFE4 930 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Dusp19Q8K4T5 220 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Sertad2Q9JJG5 309 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Hyou1Q9JKR6 999 aaKnown RBP10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 GgcxQ9QYC7 757 aa10.73□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ap1b1O35643 943 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Kcnu1O54982 1121 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 ProcP33587 460 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Dok7Q18PE0 504 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gdpd4Q3TT99 632 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Krt35Q497I4 455 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Galnt17Q7TT15 598 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Micall1Q8BGT6 870 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 4930550L24RikQ99PA7 320 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Tjap1Q9DCD5 539 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ccdc88cQ6VGS5 2009 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ces1aE9PYP1 563 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 D1Pas1P16381 660 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Cacnb3P54285 484 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Mcl1P97287 331 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Git1Q68FF6 770 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Lrrcc1Q69ZB0 1026 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Foxo6Q70KY4 559 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Celf4Q7TSY6 486 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Llgl1Q80Y17 1036 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ttll1Q91V51 423 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ddah1Q9CWS0 285 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Myl7Q9QVP4 175 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 EmcnQ9R0H2 261 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Gm28036V9GXJ1 658 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 TicrrQ8BQ33 1889 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ttc13A0A1L1SSC7 844 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Armc3A2AU72 881 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Apol10bG3X9K7 334 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Sema4dO09126 861 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 AurkbO70126 345 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Myo1fP70248 1099 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Rbm46P86049 533 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 MyrflQ3UN70 904 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Glg1Q61543 1175 aaKnown RBP10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Ttc7aQ8BGB2 858 aa10.72□□□□□ -0.69
Ccdc40-202ENSMUST00000053440 Yars2Q8BYL4 472 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms