RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Dnm3Q8BZ98 863 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Rps8P62242 208 aaKnown RBP17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Trim54Q9ERP3 366 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Usp14Q9JMA1 493 aaKnown RBP17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Yeats2Q3TUF7 1407 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Myh3P13541 1940 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 H6pdQ8CFX1 789 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Spire2Q8K1S6 718 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Adgrl1Q80TR1 1466 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Gm11985A0A1B0GS61 206 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Ptk2P34152 1090 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Clec4gQ8BNX1 294 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Slc35f6Q8VE96 372 aa17.79■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Adamts18Q4VC17 1219 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Sdf4Q61112 361 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Champ1Q8K327 802 aaKnown RBP17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Cgref1Q8R1U2 281 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Afg3l1Q920A7 789 aaKnown RBP17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Setd6Q9CWY3 473 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Ubxn11Q9D572 484 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Mylk3Q3UIZ8 795 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 C2cd5Q7TPS5 1016 aaKnown RBP17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Frmd4bQ920B0 1035 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Olfr247E9PVJ7 320 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Olfr819K7N727 320 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Kctd16Q5DTY9 427 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Abca16E9PWJ7 1678 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Spag6Q3V0U9 509 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Ino80dQ66JY2 873 aaKnown RBP17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Rlbp1Q9Z275 317 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Lrriq4A6H6A4 596 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Ino80Q6ZPV2 1559 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Akap7Q7TN79 314 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Gprasp2Q8BUY8 826 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Snx5Q9D8U8 404 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Rad51ap2G3UW63 976 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Mrpl11Q9CQF0 192 aaKnown RBP17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Dbndd1Q9CZ00 160 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Nos1Q9Z0J4 1429 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Vps4bP46467 444 aaKnown RBP17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 GlyctkQ8QZY2 523 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Tgs1Q923W1 853 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Creld2Q9CYA0 350 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Tfap4Q9JIZ5 338 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Arl6ip4Q9JM93 229 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Clic4Q9QYB1 253 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Scg2Q03517 617 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Stx3Q64704 289 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Lyve1Q8BHC0 318 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Tbc1d19Q8VDV7 526 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Adi1Q99JT9 179 aa17.78■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 VdrP48281 422 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Arid3aQ62431 601 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Churc1Q6DG52 112 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Atp1a1Q8VDN2 1023 aaKnown RBP17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Pagr1bF6V0H0 108 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Gm4340L7N2C4 268 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Mup5P11591 180 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Pcif1P59114 706 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Acbd5Q5XG73 508 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Dhx58Q99J87 678 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Pagr1aQ99L02 253 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Pdzd9Q9D9M4 266 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Upf3bQ3ULL6 472 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Caln1Q9JJG7 219 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 LrmpQ60664 539 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 RimklbQ80WS1 387 aa17.77■□□□□ 0.44
Ccdc88a-201ENSMUST00000040182 Raph1F2Z3U3 1266 aa17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Crnkl1P63154 690 aaKnown RBP17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Cep170Q6A065 1588 aa17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Psma3O70435 255 aa17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Dpp8Q80YA7 892 aa17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Rps6kc1Q8BLK9 1056 aa17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Dnajc17Q91WT4 303 aa17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Emilin1Q99K41 1017 aa17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Apopt1Q9CQW7 192 aa17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 SfnO70456 248 aaKnown RBP17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 CcnyQ8BGU5 341 aa17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ddx39aQ8VDW0 427 aaKnown RBP17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Cxcl11Q9JHH5 100 aa17.77■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gm1604bQ3TRG0 118 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Pde10aQ8CA95 790 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Creb3l3Q91XE9 479 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Zc3h4Q6ZPZ3 1304 aaKnown RBP17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Hddc2Q3SXD3 199 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Kcna6Q61923 529 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Spag7Q7TNE3 227 aaKnown RBP17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Znf12Q7TSI0 686 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Znf467Q8JZL0 594 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Snrnp35Q9D384 244 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gm29133A0A1B0GT72 266 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Tsta3P23591 321 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Frmd8Q3UFK8 466 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Nfkbil1O88995 381 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Adcy7P51829 1099 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ppme1Q8BVQ5 386 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Atp5dQ9D3D9 168 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Lrch2Q3UMG5 773 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Krt75Q8BGZ7 551 aa17.76■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Tmem119Q8R138 280 aa17.76■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms