RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YBR220CP38318 560 aa-2.12□□□□□ -2.75
snR40snR40 WSC4P38739 605 aa-2.12□□□□□ -2.75
snR40snR40 TCD1P38756 429 aa-2.12□□□□□ -2.75
snR40snR40 YIL161WP40449 235 aaKnown RBP-2.12□□□□□ -2.75
snR40snR40 TPN1P53099 579 aa-2.12□□□□□ -2.75
snR40snR40 CSL4P53859 292 aaPredicted RBP-2.12□□□□□ -2.75
snR40snR40 SMD1Q02260 146 aaPredicted RBP-2.12□□□□□ -2.75
snR40snR40 ROY1Q04847 553 aa-2.12□□□□□ -2.75
snR40snR40 TIM18Q08749 192 aa-2.12□□□□□ -2.75
snR40snR40 PSF3Q12146 194 aa-2.12□□□□□ -2.75
snR40snR40 YPL150WQ12152 901 aa-2.12□□□□□ -2.75
snR40snR40 YGK3Q12222 375 aaPredicted RBP-2.12□□□□□ -2.75
snR40snR40 PRP46Q12417 451 aaPredicted RBP-2.12□□□□□ -2.75
snR40snR40 AFI1Q99222 893 aa-2.12□□□□□ -2.75
snR40snR40 ADE4P04046 510 aaKnown RBP-2.13□□□□□ -2.75
snR40snR40 SPO16P17122 198 aa-2.13□□□□□ -2.75
snR40snR40 CPT1P17898 393 aa-2.13□□□□□ -2.75
snR40snR40 SRB5P32585 307 aa-2.13□□□□□ -2.75
snR40snR40 RAD23P32628 398 aaKnown RBP-2.13□□□□□ -2.75
snR40snR40 MRS6P32864 603 aaKnown RBP-2.13□□□□□ -2.75
snR40snR40 REG2P38232 338 aa-2.13□□□□□ -2.75
snR40snR40 ERP2P39704 215 aa-2.13□□□□□ -2.75
snR40snR40 YDR222WQ04925 415 aa-2.13□□□□□ -2.75
snR40snR40 YLR162WQ06235 118 aa-2.13□□□□□ -2.75
snR40snR40 ETT1Q08421 412 aaKnown RBP-2.13□□□□□ -2.75
snR40snR40 YGR161W-CQ3E744 92 aa-2.13□□□□□ -2.75
snR40snR40 YAL067W-AQ8TGK6 75 aa-2.13□□□□□ -2.75
snR40snR40 STE7P06784 515 aa-2.14□□□□□ -2.75
snR40snR40 TRM7P38238 310 aaKnown RBP-2.14□□□□□ -2.75
snR40snR40 JLP2P40206 208 aa-2.14□□□□□ -2.75
snR40snR40 CAB2P40506 365 aa-2.14□□□□□ -2.75
snR40snR40 AIM22P47051 409 aa-2.14□□□□□ -2.75
snR40snR40 YTM1Q12024 460 aaPredicted RBP-2.14□□□□□ -2.75
snR40snR40 YPR027CQ12079 277 aa-2.14□□□□□ -2.75
snR40snR40 RLF2Q12495 606 aa-2.14□□□□□ -2.75
snR40snR40 YPL247CQ12523 523 aa-2.14□□□□□ -2.75
snR40snR40 TOP1P04786 769 aa-2.15□□□□□ -2.75
snR40snR40 RPS18AP0CX55 146 aaKnown RBP-2.15□□□□□ -2.75
snR40snR40 RPS18BP0CX56 146 aaPredicted RBP-2.15□□□□□ -2.75
snR40snR40 NCP1P16603 691 aaKnown RBP-2.15□□□□□ -2.75
snR40snR40 RIT1P23796 513 aa-2.15□□□□□ -2.75
snR40snR40 YMR262WP38430 313 aa-2.15□□□□□ -2.75
snR40snR40 YIL029CP40538 142 aa-2.15□□□□□ -2.75
snR40snR40 IMA5P40884 581 aa-2.15□□□□□ -2.75
snR40snR40 YNL193WP53870 558 aa-2.15□□□□□ -2.75
snR40snR40 DXO1Q06349 442 aa-2.15□□□□□ -2.75
snR40snR40 RDS3Q06835 107 aaPredicted RBP-2.15□□□□□ -2.75
snR40snR40 TEN1Q07921 160 aa-2.15□□□□□ -2.75
snR40snR40 FLO11P08640 1367 aa-2.15□□□□□ -2.75
snR40snR40 TGL1P34163 548 aa-2.16□□□□□ -2.76
snR40snR40 SOL2P37262 315 aa-2.16□□□□□ -2.76
snR40snR40 SBE22P38814 852 aa-2.16□□□□□ -2.76
snR40snR40 SCS2P40075 244 aaKnown RBP-2.16□□□□□ -2.76
snR40snR40 SYG1P40528 902 aa-2.16□□□□□ -2.76
snR40snR40 VPS4P52917 437 aa-2.16□□□□□ -2.76
snR40snR40 SEH1P53011 349 aaKnown RBP-2.16□□□□□ -2.76
snR40snR40 YIP1P53039 248 aa-2.16□□□□□ -2.76
snR40snR40 PEX14P53112 341 aa-2.16□□□□□ -2.76
snR40snR40 ROG1P53118 685 aa-2.16□□□□□ -2.76
snR40snR40 YGR126WP53274 230 aa-2.16□□□□□ -2.76
snR40snR40 CEG1Q01159 459 aaPredicted RBP-2.16□□□□□ -2.76
snR40snR40 MSC1Q03104 513 aa-2.16□□□□□ -2.76
snR40snR40 CSI1Q04368 295 aa-2.16□□□□□ -2.76
snR40snR40 NYV1Q12255 253 aa-2.16□□□□□ -2.76
snR40snR40 MES1P00958 751 aaKnown RBP-2.17□□□□□ -2.76
snR40snR40 SUI2P20459 304 aaKnown RBP-2.17□□□□□ -2.76
snR40snR40 ERG8P24521 451 aa-2.17□□□□□ -2.76
snR40snR40 RNA15P25299 296 aaPredicted RBP-2.17□□□□□ -2.76
snR40snR40 HXT3P32466 567 aaKnown RBP-2.17□□□□□ -2.76
snR40snR40 YCR041WP37265 110 aa-2.17□□□□□ -2.76
snR40snR40 DIA4P38705 446 aaPredicted RBP-2.17□□□□□ -2.76
snR40snR40 MSR1P38714 643 aa-2.17□□□□□ -2.76
snR40snR40 ERR3P42222 437 aa-2.17□□□□□ -2.76
snR40snR40 PUS4P48567 403 aaKnown RBP-2.17□□□□□ -2.76
snR40snR40 SDA1P53313 767 aaKnown RBP-2.17□□□□□ -2.76
snR40snR40 ENT5Q03769 411 aaKnown RBP-2.17□□□□□ -2.76
snR40snR40 DFM1Q12743 341 aaKnown RBP-2.17□□□□□ -2.76
snR40snR40 YPL119C-AQ3E751 87 aa-2.17□□□□□ -2.76
snR40snR40 PEP4P07267 405 aaKnown RBP-2.18□□□□□ -2.76
snR40snR40 SPS19P32573 292 aaKnown RBP-2.18□□□□□ -2.76
snR40snR40 TIM23P32897 222 aa-2.18□□□□□ -2.76
snR40snR40 GPP2P40106 250 aaKnown RBP-2.18□□□□□ -2.76
snR40snR40 BUD6P41697 788 aa-2.18□□□□□ -2.76
snR40snR40 MTQ2Q03920 221 aaPredicted RBP-2.18□□□□□ -2.76
snR40snR40 YDR115WQ04598 105 aa-2.18□□□□□ -2.76
snR40snR40 SUE1Q06524 206 aa-2.18□□□□□ -2.76
snR40snR40 ARR1Q06596 294 aa-2.18□□□□□ -2.76
snR40snR40 SRO7Q12038 1033 aa-2.18□□□□□ -2.76
snR40snR40 SGT2Q12118 346 aaKnown RBP-2.18□□□□□ -2.76
snR40snR40 LEU9Q12166 604 aaKnown RBP-2.18□□□□□ -2.76
snR40snR40 RPL2AP0CX45 254 aaKnown RBP-2.19□□□□□ -2.76
snR40snR40 RPL2BP0CX46 254 aaKnown RBP-2.19□□□□□ -2.76
snR40snR40 ADH4P10127 382 aa-2.19□□□□□ -2.76
snR40snR40 PPH21P23594 369 aa-2.19□□□□□ -2.76
snR40snR40 TCM62P38228 572 aaKnown RBP-2.19□□□□□ -2.76
snR40snR40 MED8P38304 223 aa-2.19□□□□□ -2.76
snR40snR40 GEP4P38812 185 aa-2.19□□□□□ -2.76
snR40snR40 HAC1P41546 238 aa-2.19□□□□□ -2.76
snR40snR40 YJR146WP47174 117 aa-2.19□□□□□ -2.76
snR40snR40 IMA1P53051 589 aa-2.19□□□□□ -2.76
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms