RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W MRX6P48564 524 aa4.54□□□□□ -1.68
YDC1YPL087W JJJ1P53863 590 aa4.54□□□□□ -1.68
YDC1YPL087W RPL22BP56628 122 aaKnown RBP4.54□□□□□ -1.68
YDC1YPL087W MSC1Q03104 513 aa4.54□□□□□ -1.68
YDC1YPL087W RRB1Q04225 511 aaKnown RBP4.54□□□□□ -1.68
YDC1YPL087W VTI1Q04338 217 aa4.54□□□□□ -1.68
YDC1YPL087W AIM33Q04516 312 aa4.54□□□□□ -1.68
YDC1YPL087W SOV1Q04748 898 aa4.54□□□□□ -1.68
YDC1YPL087W STE23Q06010 1027 aa4.54□□□□□ -1.68
YDC1YPL087W HSC82P15108 705 aaKnown RBP4.53□□□□□ -1.68
YDC1YPL087W EXO70P19658 623 aa4.53□□□□□ -1.68
YDC1YPL087W YME1P32795 747 aa4.53□□□□□ -1.68
YDC1YPL087W TCD2P36101 447 aaKnown RBP4.53□□□□□ -1.68
YDC1YPL087W JNM1P36224 373 aa4.53□□□□□ -1.68
YDC1YPL087W SPP381P38282 291 aaPredicted RBP4.53□□□□□ -1.68
YDC1YPL087W MSR1P38714 643 aa4.53□□□□□ -1.68
YDC1YPL087W ARF3P40994 183 aaRIP-Chip data4.53□□□□□ -1.68 RIP-Chip
YDC1YPL087W FMS1P50264 508 aa4.53□□□□□ -1.68
YDC1YPL087W KAP114P53067 1004 aa4.53□□□□□ -1.68
YDC1YPL087W LIF1P53150 421 aa4.53□□□□□ -1.68
YDC1YPL087W PGA2P53903 129 aa4.53□□□□□ -1.68
YDC1YPL087W DON1Q05610 365 aa4.53□□□□□ -1.68
YDC1YPL087W YLR297WQ05899 129 aa4.53□□□□□ -1.68
YDC1YPL087W HSH49Q99181 213 aaPredicted RBP4.53□□□□□ -1.68
YDC1YPL087W MRP13P12686 339 aa4.52□□□□□ -1.69
YDC1YPL087W CLN3P13365 580 aa4.52□□□□□ -1.69
YDC1YPL087W MTF1P14908 341 aaKnown RBP4.52□□□□□ -1.69
YDC1YPL087W GCG1P32656 232 aaKnown RBP4.52□□□□□ -1.69
YDC1YPL087W TIF3P34167 436 aaKnown RBP4.52□□□□□ -1.69
YDC1YPL087W RPC25P35718 212 aa4.52□□□□□ -1.69
YDC1YPL087W RPC37P36121 282 aa4.52□□□□□ -1.69
YDC1YPL087W UIP5P36137 443 aa4.52□□□□□ -1.69
YDC1YPL087W RCK2P38623 610 aa4.52□□□□□ -1.69
YDC1YPL087W MDM31P38880 579 aa4.52□□□□□ -1.69
YDC1YPL087W UTP9P38882 575 aaKnown RBP4.52□□□□□ -1.69
YDC1YPL087W TIF4631P39935 952 aaKnown RBP4.52□□□□□ -1.69
YDC1YPL087W HMF1P40037 129 aaKnown RBP4.52□□□□□ -1.69
YDC1YPL087W IMD4P50094 524 aaKnown RBP4.52□□□□□ -1.69
YDC1YPL087W SHE10P53075 577 aa4.52□□□□□ -1.69
YDC1YPL087W ZPR1P53303 486 aaKnown RBP4.52□□□□□ -1.69
YDC1YPL087W THP1Q08231 455 aa4.52□□□□□ -1.69
YDC1YPL087W PPT2Q12036 173 aa4.52□□□□□ -1.69
YDC1YPL087W FAB1P34756 2278 aa4.51□□□□□ -1.69
YDC1YPL087W PHO2P07269 559 aa4.51□□□□□ -1.69
YDC1YPL087W APE1P14904 514 aa4.51□□□□□ -1.69
YDC1YPL087W SAM2P19358 384 aaKnown RBP4.51□□□□□ -1.69
YDC1YPL087W CDC10P25342 322 aaKnown RBP4.51□□□□□ -1.69
YDC1YPL087W PTR2P32901 601 aa4.51□□□□□ -1.69
YDC1YPL087W YBP1P38315 674 aa4.51□□□□□ -1.69
YDC1YPL087W KEL1P38853 1164 aaKnown RBP4.51□□□□□ -1.69
YDC1YPL087W VAB2P40003 282 aa4.51□□□□□ -1.69
YDC1YPL087W MIC19P43594 170 aa4.51□□□□□ -1.69
YDC1YPL087W CTK3P46963 296 aaPredicted RBP4.51□□□□□ -1.69
YDC1YPL087W NBP1P52919 319 aaPredicted RBP4.51□□□□□ -1.69
YDC1YPL087W YMR114CQ04471 368 aaKnown RBP4.51□□□□□ -1.69
YDC1YPL087W YOL075CQ08234 1294 aa4.51□□□□□ -1.69
YDC1YPL087W YOR365CQ08844 703 aa4.51□□□□□ -1.69
YDC1YPL087W HIF1Q12373 385 aa4.51□□□□□ -1.69
YDC1YPL087W GAL80P04387 435 aa4.5□□□□□ -1.69
YDC1YPL087W YCR007CP25354 239 aa4.5□□□□□ -1.69
YDC1YPL087W RPS2P25443 254 aaKnown RBP4.5□□□□□ -1.69
YDC1YPL087W YSC83P32792 385 aa4.5□□□□□ -1.69
YDC1YPL087W LAS1P36146 502 aaPredicted RBP4.5□□□□□ -1.69
YDC1YPL087W BNA4P38169 460 aa4.5□□□□□ -1.69
YDC1YPL087W PHO88P38264 188 aaPredicted RBP4.5□□□□□ -1.69
YDC1YPL087W YBR225WP38321 900 aa4.5□□□□□ -1.69
YDC1YPL087W FIS1P40515 155 aa4.5□□□□□ -1.69
YDC1YPL087W YFL040WP43562 540 aa4.5□□□□□ -1.69
YDC1YPL087W TRS85P46944 698 aa4.5□□□□□ -1.69
YDC1YPL087W NCS2P53923 493 aaPredicted RBP4.5□□□□□ -1.69
YDC1YPL087W RPM2Q02773 1202 aa4.5□□□□□ -1.69
YDC1YPL087W IVY1Q04934 453 aa4.5□□□□□ -1.69
YDC1YPL087W VPS74Q06385 345 aa4.5□□□□□ -1.69
YDC1YPL087W SMC5Q08204 1093 aa4.5□□□□□ -1.69
YDC1YPL087W RLM1Q12224 676 aa4.5□□□□□ -1.69
YDC1YPL087W RAD1P06777 1100 aa4.49□□□□□ -1.69
YDC1YPL087W CDC33P07260 213 aaKnown RBP4.49□□□□□ -1.69
YDC1YPL087W NAT1P12945 854 aaKnown RBP4.49□□□□□ -1.69
YDC1YPL087W NDC1P32500 655 aa4.49□□□□□ -1.69
YDC1YPL087W UTR4P32626 227 aa4.49□□□□□ -1.69
YDC1YPL087W SIP2P34164 415 aaKnown RBP4.49□□□□□ -1.69
YDC1YPL087W GPD2P41911 440 aaKnown RBP4.49□□□□□ -1.69
YDC1YPL087W SPH1Q06160 661 aa4.49□□□□□ -1.69
YDC1YPL087W TSR2Q06672 205 aaKnown RBP4.49□□□□□ -1.69
YDC1YPL087W TAF10Q12030 206 aa4.49□□□□□ -1.69
YDC1YPL087W NCE102Q12207 173 aaRIP-Chip data4.49□□□□□ -1.69not detected
YDC1YPL087W YDL009CQ12210 107 aa4.49□□□□□ -1.69
YDC1YPL087W SEY1Q99287 776 aa4.49□□□□□ -1.69
YDC1YPL087W YLR462WO13556 202 aa4.48□□□□□ -1.69
YDC1YPL087W RPS3P05750 240 aaKnown RBP4.48□□□□□ -1.69
YDC1YPL087W PEP4P07267 405 aaKnown RBP4.48□□□□□ -1.69
YDC1YPL087W PRP2P20095 876 aaPredicted RBP4.48□□□□□ -1.69
YDC1YPL087W COT1P32798 439 aa4.48□□□□□ -1.69
YDC1YPL087W MRE11P32829 692 aa4.48□□□□□ -1.69
YDC1YPL087W LOS1P33418 1100 aaPredicted RBP4.48□□□□□ -1.69
YDC1YPL087W WBP1P33767 430 aaKnown RBP4.48□□□□□ -1.69
YDC1YPL087W MUM2P38236 366 aa4.48□□□□□ -1.69
YDC1YPL087W YSW1P38280 609 aa4.48□□□□□ -1.69
YDC1YPL087W HIS2P38635 335 aa4.48□□□□□ -1.69
YDC1YPL087W YHL049CP38722 271 aa4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms