RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeast

Gene VPS21, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS21	YOR089C	VPS17	P32913	551 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	PDR3	P33200	976 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	ASC1	P38011	319 aa	Known RBP	4.13	□□□□□ -1.75
VPS21	YOR089C	RRN10	P38204	145 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	LEU5	P38702	357 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	SYG1	P40528	902 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	RTS2	P40962	232 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	PIB2	P53191	635 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	EKI1	Q03764	534 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	MRPL1	Q04599	285 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	GSH2	Q08220	491 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	KEL3	Q08979	651 aa	Predicted RBP	4.13	□□□□□ -1.75
VPS21	YOR089C	YLR112W	Q12130	139 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	SRN2	Q99176	213 aa		4.13	□□□□□ -1.75
VPS21	YOR089C	TY1B-A	O13527	1196 aa	Known RBP	4.12	□□□□□ -1.75
VPS21	YOR089C	HIS4	P00815	799 aa	Known RBP	4.12	□□□□□ -1.75
VPS21	YOR089C	HSP104	P31539	908 aa	Known RBP	4.12	□□□□□ -1.75
VPS21	YOR089C	RAD24	P32641	659 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	SIF2	P38262	535 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	FAU1	P40099	211 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	YMR147W	P40218	223 aa	Known RBP	4.12	□□□□□ -1.75
VPS21	YOR089C	PSA1	P41940	361 aa	Known RBP	4.12	□□□□□ -1.75
VPS21	YOR089C	DRN1	P53255	507 aa	Known RBP	4.12	□□□□□ -1.75
VPS21	YOR089C	OCA2	P53949	197 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	SAM50	P53969	484 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	YDR541C	Q03049	344 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	MGR3	Q04472	501 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	COQ11	Q05892	277 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	DIC1	Q06143	298 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	PHO92	Q06390	306 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	YDL144C	Q07589	356 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	REX4	Q08237	289 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	YNL162W-A	Q3E7A8	72 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	YRF1-2	P40105	1681 aa		4.12	□□□□□ -1.75
VPS21	YOR089C	TY4B-H	P0C2J7	1802 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	TY4B-J	P47024	1803 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	RPI1	P23250	407 aa	Known RBP	4.11	□□□□□ -1.75
VPS21	YOR089C	GEX1	P25596	615 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	RSM22	P36056	628 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	PFF1	P38244	976 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	YSW1	P38280	609 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	PCF11	P39081	626 aa	Predicted RBP	4.11	□□□□□ -1.75
VPS21	YOR089C	YIL089W	P40500	205 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	CHS6	P40955	746 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	BRO1	P48582	844 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	IZH1	Q03419	316 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	MSS11	Q03825	758 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	DBP9	Q06218	594 aa	Known RBP	4.11	□□□□□ -1.75
VPS21	YOR089C	NDL1	Q06568	189 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	YEH2	Q07950	538 aa		4.11	□□□□□ -1.75
VPS21	YOR089C	RPO41	P13433	1351 aa	Known RBP	4.11	□□□□□ -1.75
VPS21	YOR089C	YIL177C	P40434	1758 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	YJL225C	P40889	1758 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	RPS24A	P0CX31	135 aa	Known RBP	4.1	□□□□□ -1.75
VPS21	YOR089C	RPS24B	P0CX32	135 aa	Known RBP	4.1	□□□□□ -1.75
VPS21	YOR089C	MGR1	P25573	417 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	APE2	P32454	952 aa	Known RBP	4.1	□□□□□ -1.75
VPS21	YOR089C	YBL028C	P38202	106 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	RFC3	P38629	340 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	OSH3	P38713	996 aa	Known RBP	4.1	□□□□□ -1.75
VPS21	YOR089C	FLO5	P38894	1075 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	CCT2	P39076	527 aa	Known RBP	4.1	□□□□□ -1.75
VPS21	YOR089C	YMR124W	P39523	943 aa	Known RBP	4.1	□□□□□ -1.75
VPS21	YOR089C	PCL6	P40038	420 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	ELP2	P42935	788 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	MPP10	P47083	593 aa	Known RBP	4.1	□□□□□ -1.75
VPS21	YOR089C	ASN2	P49090	572 aa	Known RBP	4.1	□□□□□ -1.75
VPS21	YOR089C	YIF1	P53845	314 aa	Known RBP	4.1	□□□□□ -1.75
VPS21	YOR089C	SLD5	Q03406	294 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	TAF12	Q03761	539 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	YDR387C	Q04162	555 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	VPS74	Q06385	345 aa		4.1	□□□□□ -1.75
VPS21	YOR089C	APC1	P53886	1748 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	ADE4	P04046	510 aa	Known RBP	4.09	□□□□□ -1.75
VPS21	YOR089C	SEC63	P14906	663 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	SEC62	P21825	274 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	NDI1	P32340	513 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	ECM25	P32525	599 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	SPC34	P36131	295 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	KAP104	P38217	918 aa	Known RBP	4.09	□□□□□ -1.75
VPS21	YOR089C	GND1	P38720	489 aa	Known RBP	4.09	□□□□□ -1.75
VPS21	YOR089C	MLH1	P38920	769 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	SAS2	P40963	338 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	RPA34	P47006	233 aa	Predicted RBP	4.09	□□□□□ -1.75
VPS21	YOR089C	GIP3	Q03016	1276 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	YDR415C	Q04033	374 aa	Predicted RBP	4.09	□□□□□ -1.75
VPS21	YOR089C	MDM30	Q05930	598 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	THI7	Q05998	598 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	NSE1	Q07913	336 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	THI20	Q08224	551 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	REX3	Q12090	404 aa		4.09	□□□□□ -1.75
VPS21	YOR089C	ARO3	P14843	370 aa	Known RBP	4.08	□□□□□ -1.76
VPS21	YOR089C	ALG1	P16661	449 aa		4.08	□□□□□ -1.76
VPS21	YOR089C	AIM17	P23180	465 aa	Known RBP	4.08	□□□□□ -1.76
VPS21	YOR089C	BUB3	P26449	341 aa		4.08	□□□□□ -1.76
VPS21	YOR089C	PHO91	P27514	894 aa		4.08	□□□□□ -1.76
VPS21	YOR089C	FAA1	P30624	700 aa	Known RBP	4.08	□□□□□ -1.76
VPS21	YOR089C	SPC110	P32380	944 aa		4.08	□□□□□ -1.76
VPS21	YOR089C	ECM15	P35195	104 aa		4.08	□□□□□ -1.76
VPS21	YOR089C	SOR1	P35497	357 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms