RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C IST3P40565 148 aaPredicted RBP5.1□□□□□ -1.59
RAT1YOR048C JHD2P47156 728 aaPredicted RBP5.1□□□□□ -1.59
RAT1YOR048C PIR1Q03178 341 aa5.1□□□□□ -1.59
RAT1YOR048C RCF1Q03713 159 aa5.1□□□□□ -1.59
RAT1YOR048C GAL83Q04739 417 aa5.1□□□□□ -1.59
RAT1YOR048C YOL019WQ08157 551 aa5.1□□□□□ -1.59
RAT1YOR048C SIA1Q12212 622 aa5.1□□□□□ -1.59
RAT1YOR048C MER1P16523 270 aa5.1□□□□□ -1.59
RAT1YOR048C ERG4P25340 473 aa5.1□□□□□ -1.59
RAT1YOR048C GEX1P25596 615 aa5.1□□□□□ -1.59
RAT1YOR048C CTF13P35203 478 aa5.1□□□□□ -1.59
RAT1YOR048C GEX2P36173 615 aa5.1□□□□□ -1.59
RAT1YOR048C YRO2P38079 344 aa5.1□□□□□ -1.59
RAT1YOR048C RTC2P38279 296 aa5.1□□□□□ -1.59
RAT1YOR048C BUD13P46947 266 aaPredicted RBP5.1□□□□□ -1.59
RAT1YOR048C ART5P53244 586 aaKnown RBP5.1□□□□□ -1.59
RAT1YOR048C MRPL50P53724 139 aa5.1□□□□□ -1.59
RAT1YOR048C GSF2Q04697 403 aaKnown RBP5.1□□□□□ -1.59
RAT1YOR048C NEJ1Q06148 342 aa5.1□□□□□ -1.59
RAT1YOR048C PDR8Q06149 701 aa5.1□□□□□ -1.59
RAT1YOR048C YLR413WQ06689 675 aa5.1□□□□□ -1.59
RAT1YOR048C RAX1Q08760 435 aa5.1□□□□□ -1.59
RAT1YOR048C ENV7Q12003 364 aa5.1□□□□□ -1.59
RAT1YOR048C SCM3Q12334 223 aa5.1□□□□□ -1.59
RAT1YOR048C CBP2P03874 630 aaPredicted RBP5.1□□□□□ -1.59
RAT1YOR048C SWI5P08153 709 aa5.1□□□□□ -1.59
RAT1YOR048C HCM1P25364 564 aa5.1□□□□□ -1.59
RAT1YOR048C PEP7P32609 515 aa5.1□□□□□ -1.59
RAT1YOR048C PPQ1P32945 549 aa5.1□□□□□ -1.59
RAT1YOR048C TUL1P36096 758 aa5.1□□□□□ -1.59
RAT1YOR048C VMA7P39111 118 aa5.1□□□□□ -1.59
RAT1YOR048C YER137CP40083 148 aaKnown RBP5.1□□□□□ -1.59
RAT1YOR048C FMC1P40491 155 aa5.1□□□□□ -1.59
RAT1YOR048C MTR3P48240 250 aaPredicted RBP5.1□□□□□ -1.59
RAT1YOR048C YGR168CP53293 376 aa5.1□□□□□ -1.59
RAT1YOR048C YPQ1Q12010 308 aa5.1□□□□□ -1.59
RAT1YOR048C WHI5Q12416 295 aa5.1□□□□□ -1.59
RAT1YOR048C YDR524C-BQ3E6R4 66 aa5.1□□□□□ -1.59
RAT1YOR048C Q0010Q9ZZX9 128 aa5.1□□□□□ -1.59
RAT1YOR048C HTA1P04911 132 aaKnown RBP5.09□□□□□ -1.59
RAT1YOR048C HIS3P06633 220 aa5.09□□□□□ -1.59
RAT1YOR048C CMP2P14747 604 aa5.09□□□□□ -1.59
RAT1YOR048C KGD2P19262 463 aaPredicted RBP5.09□□□□□ -1.59
RAT1YOR048C POT1P27796 417 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
RAT1YOR048C SLX1P38324 304 aa5.09□□□□□ -1.59
RAT1YOR048C AIM2P39721 246 aa5.09□□□□□ -1.59
RAT1YOR048C ZRG8P40021 1076 aa5.09□□□□□ -1.59
RAT1YOR048C VRG4P40107 337 aa5.09□□□□□ -1.59
RAT1YOR048C TIM54P47045 478 aa5.09□□□□□ -1.59
RAT1YOR048C AIM22P47051 409 aa5.09□□□□□ -1.59
RAT1YOR048C MPC1P53157 130 aaKnown RBP5.09□□□□□ -1.59
RAT1YOR048C YNL140CP53910 189 aa5.09□□□□□ -1.59
RAT1YOR048C FLP1P03870 423 aa5.09□□□□□ -1.6
RAT1YOR048C RPS18AP0CX55 146 aaKnown RBP5.09□□□□□ -1.6
RAT1YOR048C RPS18BP0CX56 146 aaPredicted RBP5.09□□□□□ -1.6
RAT1YOR048C YCR016WP25617 290 aaKnown RBP5.09□□□□□ -1.6
RAT1YOR048C SYP1P25623 870 aaKnown RBP5.09□□□□□ -1.6
RAT1YOR048C SPT14P32363 452 aa5.09□□□□□ -1.6
RAT1YOR048C PIM1P36775 1133 aa5.09□□□□□ -1.6
RAT1YOR048C SOL2P37262 315 aa5.09□□□□□ -1.6
RAT1YOR048C SPO73P40031 143 aa5.09□□□□□ -1.6
RAT1YOR048C RRG9P40156 214 aa5.09□□□□□ -1.6
RAT1YOR048C FAF1P40546 346 aaPredicted RBP5.09□□□□□ -1.6
RAT1YOR048C IRC18P47056 224 aa5.09□□□□□ -1.6
RAT1YOR048C YJR030CP47101 745 aa5.09□□□□□ -1.6
RAT1YOR048C YJR098CP47139 656 aa5.09□□□□□ -1.6
RAT1YOR048C VEL1P53058 206 aa5.09□□□□□ -1.6
RAT1YOR048C ERV25P54837 211 aaKnown RBP5.09□□□□□ -1.6
RAT1YOR048C DID2P69771 204 aa5.09□□□□□ -1.6
RAT1YOR048C YLR225CQ05948 407 aaKnown RBP5.09□□□□□ -1.6
RAT1YOR048C YPR196WQ06595 470 aa5.09□□□□□ -1.6
RAT1YOR048C HAP2P06774 265 aa5.08□□□□□ -1.6
RAT1YOR048C CAP2P13517 287 aa5.08□□□□□ -1.6
RAT1YOR048C DAL81P21657 970 aa5.08□□□□□ -1.6
RAT1YOR048C AFT1P22149 690 aa5.08□□□□□ -1.6
RAT1YOR048C FPS1P23900 669 aa5.08□□□□□ -1.6
RAT1YOR048C STE5P32917 917 aa5.08□□□□□ -1.6
RAT1YOR048C NIC96P34077 839 aa5.08□□□□□ -1.6
RAT1YOR048C LST4P34239 828 aa5.08□□□□□ -1.6
RAT1YOR048C HPA3P39979 161 aa5.08□□□□□ -1.6
RAT1YOR048C MXR1P40029 184 aa5.08□□□□□ -1.6
RAT1YOR048C PRE6P40303 254 aaKnown RBP5.08□□□□□ -1.6
RAT1YOR048C LEM3P42838 414 aa5.08□□□□□ -1.6
RAT1YOR048C RET2P43621 546 aa5.08□□□□□ -1.6
RAT1YOR048C GCD14P46959 383 aaPredicted RBP5.08□□□□□ -1.6
RAT1YOR048C YNR065CP53751 1116 aa5.08□□□□□ -1.6
RAT1YOR048C RRP17Q04031 235 aaPredicted RBP5.08□□□□□ -1.6
RAT1YOR048C HEL2Q05580 639 aaKnown RBP5.08□□□□□ -1.6
RAT1YOR048C ENT2Q05785 613 aa5.08□□□□□ -1.6
RAT1YOR048C BAG7Q12128 409 aa5.08□□□□□ -1.6
RAT1YOR048C RPS9BP05755 195 aaKnown RBP5.08□□□□□ -1.6
RAT1YOR048C YAR066WP0CX18 203 aa5.08□□□□□ -1.6
RAT1YOR048C YHR214WP0CX19 203 aa5.08□□□□□ -1.6
RAT1YOR048C GAL3P13045 520 aa5.08□□□□□ -1.6
RAT1YOR048C CHA1P25379 360 aaKnown RBP5.08□□□□□ -1.6
RAT1YOR048C YKR051WP36142 418 aa5.08□□□□□ -1.6
RAT1YOR048C FCY21P40039 528 aa5.08□□□□□ -1.6
RAT1YOR048C RRD1P40454 393 aaKnown RBP5.08□□□□□ -1.6
RAT1YOR048C YFL052WP43551 465 aa5.08□□□□□ -1.6
RAT1YOR048C VPS25P47142 202 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms