RNA–Protein interactions for RNA: YOR009W

TIR4, Transcript of Cell wall mannoprotein, yeast

Gene TIR4, Length 1,464 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR4	YOR009W	NTG1	P31378	399 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	CDC3	P32457	520 aa	Known RBP	11.53	□□□□□ -0.56
TIR4	YOR009W	NUP2	P32499	720 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	CDC13	P32797	924 aa	Known RBP	11.53	□□□□□ -0.56
TIR4	YOR009W	PEP12	P32854	288 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	SSO1	P32867	290 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	SKN1	P33336	771 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	MDJ1	P35191	511 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	MNN2	P38069	597 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	BNA4	P38169	460 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	RBG1	P39729	369 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	ELP2	P42935	788 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	ATP22	P50273	684 aa	Predicted RBP	11.53	□□□□□ -0.56
TIR4	YOR009W	THP1	Q08231	455 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	YOL107W	Q12239	342 aa		11.53	□□□□□ -0.56
TIR4	YOR009W	TIM9	O74700	87 aa		11.52	□□□□□ -0.56
TIR4	YOR009W	GAL7	P08431	366 aa		11.52	□□□□□ -0.56
TIR4	YOR009W	CLB4	P24871	460 aa		11.52	□□□□□ -0.56
TIR4	YOR009W	ERG1	P32476	496 aa	Known RBP	11.52	□□□□□ -0.56
TIR4	YOR009W	TSL1	P38427	1098 aa	Known RBP	11.52	□□□□□ -0.56
TIR4	YOR009W	YPS6	P40583	537 aa		11.52	□□□□□ -0.56
TIR4	YOR009W	YLR036C	Q07986	203 aa		11.52	□□□□□ -0.56
TIR4	YOR009W	RPP1B	P10622	106 aa	Known RBP	11.51	□□□□□ -0.57
TIR4	YOR009W	ATR1	P13090	542 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	SFA1	P32771	386 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	YHL012W	P38709	493 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	QDR2	P40474	542 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	PAC11	P40960	533 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	ROG1	P53118	685 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	CSL4	P53859	292 aa	Predicted RBP	11.51	□□□□□ -0.57
TIR4	YOR009W	RRP12	Q12754	1228 aa	Known RBP	11.51	□□□□□ -0.57
TIR4	YOR009W	MDM12	Q92328	271 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	CTS1	P29029	562 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	SPC34	P36131	295 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	NEO1	P40527	1151 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	BNA3	P47039	444 aa	Known RBP	11.51	□□□□□ -0.57
TIR4	YOR009W	TEN1	Q07921	160 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	DIN7	Q12086	430 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	YDR262W	Q12331	272 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	YDL199C	Q12407	687 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	YOL159C-A	Q3E769	90 aa		11.51	□□□□□ -0.57
TIR4	YOR009W	EHT1	P38295	451 aa		11.5	□□□□□ -0.57
TIR4	YOR009W	YHR112C	P38716	378 aa		11.5	□□□□□ -0.57
TIR4	YOR009W	LTP1	P40347	161 aa		11.5	□□□□□ -0.57
TIR4	YOR009W	MPM1	P40364	252 aa		11.5	□□□□□ -0.57
TIR4	YOR009W	VMA10	P48836	114 aa	Known RBP	11.5	□□□□□ -0.57
TIR4	YOR009W	DCP2	P53550	970 aa	Known RBP	11.5	□□□□□ -0.57
TIR4	YOR009W	YDR239C	Q03780	787 aa		11.5	□□□□□ -0.57
TIR4	YOR009W	DTD1	Q07648	150 aa	Known RBP	11.5	□□□□□ -0.57
TIR4	YOR009W	MCA1	Q08601	432 aa		11.5	□□□□□ -0.57
TIR4	YOR009W	RHO1	P06780	209 aa	Known RBP	11.49	□□□□□ -0.57
TIR4	YOR009W	STE7	P06784	515 aa		11.49	□□□□□ -0.57
TIR4	YOR009W	FBA1	P14540	359 aa	Known RBP	11.49	□□□□□ -0.57
TIR4	YOR009W	YCL049C	P25577	312 aa		11.49	□□□□□ -0.57
TIR4	YOR009W	AIM2	P39721	246 aa		11.49	□□□□□ -0.57
TIR4	YOR009W	RIO2	P40160	425 aa	Known RBP	11.49	□□□□□ -0.57
TIR4	YOR009W	TOM22	P49334	152 aa		11.49	□□□□□ -0.57
TIR4	YOR009W	BOP2	Q06150	570 aa		11.49	□□□□□ -0.57
TIR4	YOR009W	LOT6	Q07923	191 aa		11.49	□□□□□ -0.57
TIR4	YOR009W	XYL2	Q07993	356 aa		11.49	□□□□□ -0.57
TIR4	YOR009W	PUS9	Q12069	462 aa		11.49	□□□□□ -0.57
TIR4	YOR009W	RKM5	Q12367	367 aa		11.49	□□□□□ -0.57
TIR4	YOR009W	PTP1	P25044	335 aa		11.48	□□□□□ -0.57
TIR4	YOR009W	POL4	P25615	582 aa		11.48	□□□□□ -0.57
TIR4	YOR009W	UBC8	P28263	218 aa		11.48	□□□□□ -0.57
TIR4	YOR009W	PTP2	P29461	750 aa		11.48	□□□□□ -0.57
TIR4	YOR009W	PRO1	P32264	428 aa		11.48	□□□□□ -0.57
TIR4	YOR009W	APE2	P32454	952 aa	Known RBP	11.48	□□□□□ -0.57
TIR4	YOR009W	SUI1	P32911	108 aa	Known RBP	11.48	□□□□□ -0.57
TIR4	YOR009W	LHP1	P33399	275 aa	Known RBP	11.48	□□□□□ -0.57
TIR4	YOR009W	YHR177W	P38867	453 aa		11.48	□□□□□ -0.57
TIR4	YOR009W	OAZ1	Q02803	292 aa		11.48	□□□□□ -0.57
TIR4	YOR009W	APC4	Q04601	652 aa		11.48	□□□□□ -0.57
TIR4	YOR009W	MMT2	Q08970	484 aa		11.48	□□□□□ -0.57
TIR4	YOR009W	LAG2	Q92325	660 aa		11.48	□□□□□ -0.57
TIR4	YOR009W	TOR2	P32600	2474 aa	Known RBP	11.47	□□□□□ -0.57
TIR4	YOR009W	MER1	P16523	270 aa		11.47	□□□□□ -0.57
TIR4	YOR009W	SCO2	P38072	301 aa		11.47	□□□□□ -0.57
TIR4	YOR009W	FAU1	P40099	211 aa		11.47	□□□□□ -0.57
TIR4	YOR009W	ESF2	P53743	316 aa	Known RBP	11.47	□□□□□ -0.57
TIR4	YOR009W	SWA2	Q06677	668 aa		11.47	□□□□□ -0.57
TIR4	YOR009W	VPS33	P20795	691 aa		11.46	□□□□□ -0.57
TIR4	YOR009W	PDS1	P40316	373 aa	Predicted RBP	11.46	□□□□□ -0.57
TIR4	YOR009W	LYS12	P40495	371 aa	Known RBP	11.46	□□□□□ -0.57
TIR4	YOR009W	PAC10	P48363	199 aa		11.46	□□□□□ -0.57
TIR4	YOR009W	YGR250C	P53316	781 aa	Known RBP	11.46	□□□□□ -0.57
TIR4	YOR009W	STP3	Q05937	343 aa		11.46	□□□□□ -0.57
TIR4	YOR009W	PUS7	Q08647	676 aa	Known RBP	11.46	□□□□□ -0.57
TIR4	YOR009W	SNF5	P18480	905 aa		11.45	□□□□□ -0.58
TIR4	YOR009W	PRP2	P20095	876 aa	Predicted RBP	11.45	□□□□□ -0.58
TIR4	YOR009W	NTH1	P32356	751 aa		11.45	□□□□□ -0.58
TIR4	YOR009W	MKK1	P32490	508 aa		11.45	□□□□□ -0.58
TIR4	YOR009W	BCK2	P33306	851 aa		11.45	□□□□□ -0.58
TIR4	YOR009W	UTH1	P36135	365 aa		11.45	□□□□□ -0.58
TIR4	YOR009W	OMA1	P36163	345 aa		11.45	□□□□□ -0.58
TIR4	YOR009W	MNL1	P38888	796 aa		11.45	□□□□□ -0.58
TIR4	YOR009W	YRB2	P40517	327 aa		11.45	□□□□□ -0.58
TIR4	YOR009W	RPL10	P41805	221 aa	Known RBP	11.45	□□□□□ -0.58
TIR4	YOR009W	RHO4	Q00246	291 aa		11.45	□□□□□ -0.58
TIR4	YOR009W	YMR226C	Q05016	267 aa	Known RBP	11.45	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms