RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W ATG9Q12142 997 aa3.82□□□□□ -1.8
PUB1YNL016W MED4Q12343 284 aa3.82□□□□□ -1.8
PUB1YNL016W YER175W-AQ8TGU4 54 aa3.82□□□□□ -1.8
PUB1YNL016W SRN2Q99176 213 aa3.82□□□□□ -1.8
PUB1YNL016W PGK1P00560 416 aaKnown RBP3.81□□□□□ -1.8
PUB1YNL016W HIS5P07172 385 aa3.81□□□□□ -1.8
PUB1YNL016W ARG80P07249 177 aa3.81□□□□□ -1.8
PUB1YNL016W RNR2P09938 399 aaKnown RBP3.81□□□□□ -1.8
PUB1YNL016W GAL3P13045 520 aa3.81□□□□□ -1.8
PUB1YNL016W PCT1P13259 424 aa3.81□□□□□ -1.8
PUB1YNL016W RSR1P13856 272 aa3.81□□□□□ -1.8
PUB1YNL016W MSS116P15424 664 aaKnown RBP3.81□□□□□ -1.8
PUB1YNL016W CDC42P19073 191 aa3.81□□□□□ -1.8
PUB1YNL016W BOS1P25385 244 aa3.81□□□□□ -1.8
PUB1YNL016W IMG1P25626 169 aa3.81□□□□□ -1.8
PUB1YNL016W ERG1P32476 496 aaKnown RBP3.81□□□□□ -1.8
PUB1YNL016W YKR015CP36111 568 aa3.81□□□□□ -1.8
PUB1YNL016W PXL1P36166 706 aa3.81□□□□□ -1.8
PUB1YNL016W ASC1P38011 319 aaKnown RBP3.81□□□□□ -1.8
PUB1YNL016W TAE1P38340 232 aa3.81□□□□□ -1.8
PUB1YNL016W MNL1P38888 796 aa3.81□□□□□ -1.8
PUB1YNL016W MSS2P40990 351 aa3.81□□□□□ -1.8
PUB1YNL016W DPB11P47027 764 aaPredicted RBP3.81□□□□□ -1.8
PUB1YNL016W EMC2P47133 292 aaKnown RBP3.81□□□□□ -1.8
PUB1YNL016W TRF5P48561 642 aaKnown RBP3.81□□□□□ -1.8
PUB1YNL016W ASN2P49090 572 aaKnown RBP3.81□□□□□ -1.8
PUB1YNL016W YGL185CP53100 379 aa3.81□□□□□ -1.8
PUB1YNL016W YGR127WP53275 312 aa3.81□□□□□ -1.8
PUB1YNL016W ZPR1P53303 486 aaKnown RBP3.81□□□□□ -1.8
PUB1YNL016W IST1P53843 298 aaPredicted RBP3.81□□□□□ -1.8
PUB1YNL016W KTR6P54070 446 aa3.81□□□□□ -1.8
PUB1YNL016W YDR541CQ03049 344 aa3.81□□□□□ -1.8
PUB1YNL016W UFO1Q04511 668 aa3.81□□□□□ -1.8
PUB1YNL016W YLL007CQ07799 665 aa3.81□□□□□ -1.8
PUB1YNL016W CRT10Q08226 957 aa3.81□□□□□ -1.8
PUB1YNL016W ETT1Q08421 412 aaKnown RBP3.81□□□□□ -1.8
PUB1YNL016W INP53Q12271 1107 aa3.81□□□□□ -1.8
PUB1YNL016W HXK2P04807 486 aaKnown RBP3.8□□□□□ -1.8
PUB1YNL016W PDE2P06776 526 aa3.8□□□□□ -1.8
PUB1YNL016W SRV2P17555 526 aaKnown RBP3.8□□□□□ -1.8
PUB1YNL016W RNR3P21672 869 aaKnown RBP3.8□□□□□ -1.8
PUB1YNL016W CNE1P27825 502 aa3.8□□□□□ -1.8
PUB1YNL016W MVD1P32377 396 aaKnown RBP3.8□□□□□ -1.8
PUB1YNL016W MEI5P32489 222 aa3.8□□□□□ -1.8
PUB1YNL016W SUA5P32579 426 aa3.8□□□□□ -1.8
PUB1YNL016W MGM101P32787 269 aaKnown RBP3.8□□□□□ -1.8
PUB1YNL016W CSE2P33308 149 aa3.8□□□□□ -1.8
PUB1YNL016W CBF5P33322 483 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
PUB1YNL016W ARA1P38115 344 aa3.8□□□□□ -1.8
PUB1YNL016W IMD2P38697 523 aaKnown RBP3.8□□□□□ -1.8
PUB1YNL016W SIP3P38717 1229 aa3.8□□□□□ -1.8
PUB1YNL016W TCD1P38756 429 aa3.8□□□□□ -1.8
PUB1YNL016W PIH1P38768 344 aa3.8□□□□□ -1.8
PUB1YNL016W YHR210CP38893 341 aa3.8□□□□□ -1.8
PUB1YNL016W ELO1P39540 310 aa3.8□□□□□ -1.8
PUB1YNL016W MPS3P47069 682 aa3.8□□□□□ -1.8
PUB1YNL016W NPA3P47122 385 aa3.8□□□□□ -1.8
PUB1YNL016W YIP5P53108 310 aa3.8□□□□□ -1.8
PUB1YNL016W CAF130P53280 1122 aaPredicted RBP3.8□□□□□ -1.8
PUB1YNL016W DBP6P53734 629 aaKnown RBP3.8□□□□□ -1.8
PUB1YNL016W PGA2P53903 129 aa3.8□□□□□ -1.8
PUB1YNL016W SRL4Q03085 281 aa3.8□□□□□ -1.8
PUB1YNL016W EKI1Q03764 534 aa3.8□□□□□ -1.8
PUB1YNL016W URC2Q04411 772 aa3.8□□□□□ -1.8
PUB1YNL016W SSQ1Q05931 657 aaPredicted RBP3.8□□□□□ -1.8
PUB1YNL016W RRG8Q06109 277 aa3.8□□□□□ -1.8
PUB1YNL016W VAC14Q06708 880 aa3.8□□□□□ -1.8
PUB1YNL016W RKM1Q08961 583 aaPredicted RBP3.8□□□□□ -1.8
PUB1YNL016W YPL216WQ08964 1102 aa3.8□□□□□ -1.8
PUB1YNL016W CYC1P00044 109 aaPredicted RBP3.79□□□□□ -1.8
PUB1YNL016W COX1P00401 534 aa3.79□□□□□ -1.8
PUB1YNL016W ADE4P04046 510 aaKnown RBP3.79□□□□□ -1.8
PUB1YNL016W GPH1P06738 902 aaKnown RBP3.79□□□□□ -1.8
PUB1YNL016W PUT2P07275 575 aa3.79□□□□□ -1.8
PUB1YNL016W GPA1P08539 472 aa3.79□□□□□ -1.8
PUB1YNL016W WHI2P12611 486 aa3.79□□□□□ -1.8
PUB1YNL016W SEC62P21825 274 aa3.79□□□□□ -1.8
PUB1YNL016W MEK1P24719 497 aaPredicted RBP3.79□□□□□ -1.8
PUB1YNL016W RPL5P26321 297 aaKnown RBP3.79□□□□□ -1.8
PUB1YNL016W RAD14P28519 371 aa3.79□□□□□ -1.8
PUB1YNL016W SRB4P32569 687 aa3.79□□□□□ -1.8
PUB1YNL016W PEX2P32800 271 aa3.79□□□□□ -1.8
PUB1YNL016W KKQ8P36004 724 aa3.79□□□□□ -1.8
PUB1YNL016W SWC5P38326 303 aa3.79□□□□□ -1.8
PUB1YNL016W LNP1P38878 278 aa3.79□□□□□ -1.8
PUB1YNL016W ECM10P39987 644 aa3.79□□□□□ -1.8
PUB1YNL016W YIR014WP40570 242 aa3.79□□□□□ -1.8
PUB1YNL016W CDC40P40968 455 aaPredicted RBP3.79□□□□□ -1.8
PUB1YNL016W UBX6P47049 396 aa3.79□□□□□ -1.8
PUB1YNL016W RIB4P50861 169 aaPredicted RBP3.79□□□□□ -1.8
PUB1YNL016W TIM21P53220 239 aa3.79□□□□□ -1.8
PUB1YNL016W COQ6P53318 479 aa3.79□□□□□ -1.8
PUB1YNL016W YNL092WP53934 400 aa3.79□□□□□ -1.8
PUB1YNL016W OCA2P53949 197 aa3.79□□□□□ -1.8
PUB1YNL016W SLG1P54867 378 aa3.79□□□□□ -1.8
PUB1YNL016W MSC1Q03104 513 aa3.79□□□□□ -1.8
PUB1YNL016W WAR1Q03631 944 aa3.79□□□□□ -1.8
PUB1YNL016W COQ9Q05779 260 aa3.79□□□□□ -1.8
PUB1YNL016W ECM7Q06200 448 aa3.79□□□□□ -1.8
PUB1YNL016W IPK1Q06667 281 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms