RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C RRP46P53256 223 aaPredicted RBP4.81□□□□□ -1.64
PSE1YMR308C YMR209CQ03648 457 aa4.81□□□□□ -1.64
PSE1YMR308C DLT1Q04216 342 aa4.81□□□□□ -1.64
PSE1YMR308C ADY4Q05955 493 aa4.81□□□□□ -1.64
PSE1YMR308C RCL1Q08096 367 aaPredicted RBP4.81□□□□□ -1.64
PSE1YMR308C SCP1Q08873 200 aa4.81□□□□□ -1.64
PSE1YMR308C ELG1Q12050 791 aa4.81□□□□□ -1.64
PSE1YMR308C RUP1Q12242 671 aa4.81□□□□□ -1.64
PSE1YMR308C SEC7P11075 2009 aaKnown RBP4.81□□□□□ -1.64
PSE1YMR308C VPS63O13549 108 aa4.81□□□□□ -1.64
PSE1YMR308C MCM4P30665 933 aaKnown RBP4.81□□□□□ -1.64
PSE1YMR308C TCD2P36101 447 aaKnown RBP4.81□□□□□ -1.64
PSE1YMR308C YBR220CP38318 560 aa4.81□□□□□ -1.64
PSE1YMR308C SHG1P38337 142 aa4.81□□□□□ -1.64
PSE1YMR308C TIF11P38912 153 aaKnown RBP4.81□□□□□ -1.64
PSE1YMR308C SER33P40510 469 aa4.81□□□□□ -1.64
PSE1YMR308C MTD1Q02046 320 aaKnown RBP4.81□□□□□ -1.64
PSE1YMR308C MTG1Q03151 367 aaPredicted RBP4.81□□□□□ -1.64
PSE1YMR308C CSM3Q04659 317 aa4.81□□□□□ -1.64
PSE1YMR308C CRT10Q08226 957 aa4.81□□□□□ -1.64
PSE1YMR308C TUM1Q08686 304 aaKnown RBP4.81□□□□□ -1.64
PSE1YMR308C HTB1P02293 131 aaKnown RBP4.8□□□□□ -1.64
PSE1YMR308C HTB2P02294 131 aa4.8□□□□□ -1.64
PSE1YMR308C RPL6BP05739 176 aaKnown RBP4.8□□□□□ -1.64
PSE1YMR308C ERD2P18414 219 aa4.8□□□□□ -1.64
PSE1YMR308C PBN1P25580 416 aa4.8□□□□□ -1.64
PSE1YMR308C RPS5P26783 225 aaKnown RBP4.8□□□□□ -1.64
PSE1YMR308C CYS3P31373 394 aaKnown RBP4.8□□□□□ -1.64
PSE1YMR308C ECM8P38246 354 aa4.8□□□□□ -1.64
PSE1YMR308C YHR112CP38716 378 aa4.8□□□□□ -1.64
PSE1YMR308C GPB2P39717 880 aa4.8□□□□□ -1.64
PSE1YMR308C PHO86P46956 311 aa4.8□□□□□ -1.64
PSE1YMR308C COS5P47187 383 aa4.8□□□□□ -1.64
PSE1YMR308C ORC5P50874 479 aa4.8□□□□□ -1.64
PSE1YMR308C COS1P53822 381 aa4.8□□□□□ -1.64
PSE1YMR308C RHO3Q00245 231 aaKnown RBP4.8□□□□□ -1.64
PSE1YMR308C HIM1Q06674 414 aa4.8□□□□□ -1.64
PSE1YMR308C GAS5Q08193 484 aa4.8□□□□□ -1.64
PSE1YMR308C YNG1Q08465 219 aa4.8□□□□□ -1.64
PSE1YMR308C FMP16Q12497 93 aa4.8□□□□□ -1.64
PSE1YMR308C FSH3Q99369 266 aa4.8□□□□□ -1.64
PSE1YMR308C VPS15P22219 1454 aa4.8□□□□□ -1.64
PSE1YMR308C CDC7P06243 507 aa4.8□□□□□ -1.64
PSE1YMR308C ERG20P08524 352 aaKnown RBP4.8□□□□□ -1.64
PSE1YMR308C MDH1P17505 334 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
PSE1YMR308C ATP12P22135 325 aa4.8□□□□□ -1.64
PSE1YMR308C TGL1P34163 548 aa4.8□□□□□ -1.64
PSE1YMR308C YBR284WP38150 797 aa4.8□□□□□ -1.64
PSE1YMR308C YHR122WP38829 231 aa4.8□□□□□ -1.64
PSE1YMR308C PDS1P40316 373 aaPredicted RBP4.8□□□□□ -1.64
PSE1YMR308C MAM33P40513 266 aa4.8□□□□□ -1.64
PSE1YMR308C ALY2P47029 1046 aa4.8□□□□□ -1.64
PSE1YMR308C YJR096WP47137 282 aa4.8□□□□□ -1.64
PSE1YMR308C ZPR1P53303 486 aaKnown RBP4.8□□□□□ -1.64
PSE1YMR308C RTT102P53330 157 aa4.8□□□□□ -1.64
PSE1YMR308C VPS75P53853 264 aa4.8□□□□□ -1.64
PSE1YMR308C NMA111P53920 997 aa4.8□□□□□ -1.64
PSE1YMR308C TIM44Q01852 431 aa4.8□□□□□ -1.64
PSE1YMR308C YDR061WQ12298 539 aa4.8□□□□□ -1.64
PSE1YMR308C RRD2Q12461 358 aa4.8□□□□□ -1.64
PSE1YMR308C BNR1P40450 1375 aa4.8□□□□□ -1.64
PSE1YMR308C YOR304C-AO14468 76 aa4.8□□□□□ -1.64
PSE1YMR308C TDH2P00358 332 aaKnown RBP4.8□□□□□ -1.64
PSE1YMR308C TDH3P00359 332 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
PSE1YMR308C RPL1AP0CX43 217 aaKnown RBP4.8□□□□□ -1.64
PSE1YMR308C RPL1BP0CX44 217 aaKnown RBP4.8□□□□□ -1.64
PSE1YMR308C NHP6AP11632 93 aaKnown RBP4.8□□□□□ -1.64
PSE1YMR308C MCH2P36032 473 aa4.8□□□□□ -1.64
PSE1YMR308C YGR026WP53217 278 aa4.8□□□□□ -1.64
PSE1YMR308C YNL140CP53910 189 aa4.8□□□□□ -1.64
PSE1YMR308C MSC2Q03455 724 aa4.8□□□□□ -1.64
PSE1YMR308C PLB2Q03674 706 aa4.8□□□□□ -1.64
PSE1YMR308C OSW1Q08692 278 aa4.8□□□□□ -1.64
PSE1YMR308C KRE5P22023 1365 aa4.79□□□□□ -1.64
PSE1YMR308C NGR1P32831 672 aaKnown RBP4.79□□□□□ -1.64
PSE1YMR308C SLC1P33333 303 aa4.79□□□□□ -1.64
PSE1YMR308C TAF14P35189 244 aa4.79□□□□□ -1.64
PSE1YMR308C SHE3P38272 425 aaKnown RBP4.79□□□□□ -1.64
PSE1YMR308C BIT2P38346 545 aa4.79□□□□□ -1.64
PSE1YMR308C PCA1P38360 1216 aa4.79□□□□□ -1.64
PSE1YMR308C SSP120P39931 234 aaKnown RBP4.79□□□□□ -1.64
PSE1YMR308C ERG28P40030 148 aa4.79□□□□□ -1.64
PSE1YMR308C ALR2P43553 858 aa4.79□□□□□ -1.64
PSE1YMR308C RGD2P43556 714 aa4.79□□□□□ -1.64
PSE1YMR308C HOC1P47124 396 aa4.79□□□□□ -1.64
PSE1YMR308C LYS20P48570 428 aaKnown RBP4.79□□□□□ -1.64
PSE1YMR308C RPA49Q01080 415 aaPredicted RBP4.79□□□□□ -1.64
PSE1YMR308C YDR541CQ03049 344 aa4.79□□□□□ -1.64
PSE1YMR308C EFR3Q03653 782 aaKnown RBP4.79□□□□□ -1.64
PSE1YMR308C GPI17Q04080 534 aa4.79□□□□□ -1.64
PSE1YMR308C YDR109CQ04585 715 aa4.79□□□□□ -1.64
PSE1YMR308C NSL1Q12143 216 aa4.79□□□□□ -1.64
PSE1YMR308C RIB2Q12362 591 aaKnown RBP4.79□□□□□ -1.64
PSE1YMR308C GBP2P25555 427 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
PSE1YMR308C PRE4P30657 266 aa4.79□□□□□ -1.64
PSE1YMR308C UGX2P32772 223 aa4.79□□□□□ -1.64
PSE1YMR308C IMP3P32899 183 aaPredicted RBP4.79□□□□□ -1.64
PSE1YMR308C AST1P35183 429 aa4.79□□□□□ -1.64
PSE1YMR308C AGP2P38090 596 aa4.79□□□□□ -1.64
PSE1YMR308C YBR139WP38109 508 aa4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms