RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W FUN19P28003 413 aaPredicted RBP3.58□□□□□ -1.84
CSM3YMR048W FRE1P32791 686 aa3.58□□□□□ -1.84
CSM3YMR048W CBP4P37267 147 aa3.58□□□□□ -1.84
CSM3YMR048W TCM62P38228 572 aaKnown RBP3.58□□□□□ -1.84
CSM3YMR048W SMF1P38925 575 aa3.58□□□□□ -1.84
CSM3YMR048W PES4P39684 611 aa3.58□□□□□ -1.84
CSM3YMR048W TIF4631P39935 952 aaKnown RBP3.58□□□□□ -1.84
CSM3YMR048W YOR365CQ08844 703 aa3.58□□□□□ -1.84
CSM3YMR048W LSP1Q12230 341 aaKnown RBP3.58□□□□□ -1.84
CSM3YMR048W SFI1Q12369 946 aa3.58□□□□□ -1.84
CSM3YMR048W RPL3P14126 387 aaKnown RBP3.57□□□□□ -1.84
CSM3YMR048W EXO70P19658 623 aa3.57□□□□□ -1.84
CSM3YMR048W ELO2P25358 347 aa3.57□□□□□ -1.84
CSM3YMR048W DUG2P38149 878 aa3.57□□□□□ -1.84
CSM3YMR048W SHC1P39000 512 aa3.57□□□□□ -1.84
CSM3YMR048W POM152P39685 1337 aa3.57□□□□□ -1.84
CSM3YMR048W HAT2P39984 401 aa3.57□□□□□ -1.84
CSM3YMR048W GPD2P41911 440 aaKnown RBP3.57□□□□□ -1.84
CSM3YMR048W SDT1P53078 280 aa3.57□□□□□ -1.84
CSM3YMR048W MNP1P53163 194 aaPredicted RBP3.57□□□□□ -1.84
CSM3YMR048W JJJ1P53863 590 aa3.57□□□□□ -1.84
CSM3YMR048W SCM3Q12334 223 aa3.57□□□□□ -1.84
CSM3YMR048W MES1P00958 751 aaKnown RBP3.56□□□□□ -1.84
CSM3YMR048W OPI1P21957 404 aa3.56□□□□□ -1.84
CSM3YMR048W RNA14P25298 677 aaKnown RBP3.56□□□□□ -1.84
CSM3YMR048W AFG1P32317 509 aa3.56□□□□□ -1.84
CSM3YMR048W HXT1P32465 570 aa3.56□□□□□ -1.84
CSM3YMR048W UTR4P32626 227 aa3.56□□□□□ -1.84
CSM3YMR048W MSN2P33748 704 aa3.56□□□□□ -1.84
CSM3YMR048W VTC2P43585 828 aa3.56□□□□□ -1.84
CSM3YMR048W OCA1P50946 238 aaPredicted RBP3.56□□□□□ -1.84
CSM3YMR048W GPI1P53306 609 aa3.56□□□□□ -1.84
CSM3YMR048W YMR155WQ03795 547 aa3.56□□□□□ -1.84
CSM3YMR048W RQC1Q05468 723 aaKnown RBP3.56□□□□□ -1.84
CSM3YMR048W PHO92Q06390 306 aa3.56□□□□□ -1.84
CSM3YMR048W YOR387CQ08910 206 aa3.56□□□□□ -1.84
CSM3YMR048W UTP10P42945 1769 aaKnown RBP3.56□□□□□ -1.84
CSM3YMR048W SUC2P00724 532 aa3.55□□□□□ -1.84
CSM3YMR048W KRE2P27809 442 aa3.55□□□□□ -1.84
CSM3YMR048W IDH2P28241 369 aaKnown RBP3.55□□□□□ -1.84
CSM3YMR048W RAD14P28519 371 aa3.55□□□□□ -1.84
CSM3YMR048W DEG1P31115 442 aaKnown RBP3.55□□□□□ -1.84
CSM3YMR048W ERG3P32353 365 aa3.55□□□□□ -1.84
CSM3YMR048W PAD1P33751 242 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
CSM3YMR048W SAS3P34218 831 aa3.55□□□□□ -1.84
CSM3YMR048W BYE1P36106 594 aa3.55□□□□□ -1.84
CSM3YMR048W ELP2P42935 788 aa3.55□□□□□ -1.84
CSM3YMR048W RRN11Q04712 507 aa3.55□□□□□ -1.84
CSM3YMR048W REC107P21651 314 aa3.54□□□□□ -1.84
CSM3YMR048W PPH22P23595 377 aa3.54□□□□□ -1.84
CSM3YMR048W SPB1P25582 841 aaPredicted RBP3.54□□□□□ -1.84
CSM3YMR048W SMY1P32364 656 aaKnown RBP3.54□□□□□ -1.84
CSM3YMR048W MFT1P33441 392 aaKnown RBP3.54□□□□□ -1.84
CSM3YMR048W YBL059WP34224 193 aa3.54□□□□□ -1.84
CSM3YMR048W MPE1P35728 441 aaKnown RBP3.54□□□□□ -1.84
CSM3YMR048W YGR210CP42942 411 aa3.54□□□□□ -1.84
CSM3YMR048W YGR149WP48236 432 aa3.54□□□□□ -1.84
CSM3YMR048W YGL108CP53139 140 aa3.54□□□□□ -1.84
CSM3YMR048W YGL039WP53183 348 aaKnown RBP3.54□□□□□ -1.84
CSM3YMR048W DRN1P53255 507 aaKnown RBP3.54□□□□□ -1.84
CSM3YMR048W PRP42Q03776 544 aaKnown RBP3.54□□□□□ -1.84
CSM3YMR048W RHO2P06781 192 aa3.53□□□□□ -1.84
CSM3YMR048W CPR1P14832 162 aaKnown RBP3.53□□□□□ -1.84
CSM3YMR048W SRV2P17555 526 aaKnown RBP3.53□□□□□ -1.84
CSM3YMR048W NAM9P27929 486 aa3.53□□□□□ -1.84
CSM3YMR048W SEC66P33754 206 aa3.53□□□□□ -1.84
CSM3YMR048W HCS1P34243 683 aa3.53□□□□□ -1.84
CSM3YMR048W RSM22P36056 628 aa3.53□□□□□ -1.84
CSM3YMR048W MTC6P38849 526 aa3.53□□□□□ -1.84
CSM3YMR048W PTH1P38876 190 aaKnown RBP3.53□□□□□ -1.84
CSM3YMR048W SSU1P41930 458 aa3.53□□□□□ -1.84
CSM3YMR048W RMD9P53140 646 aaKnown RBP3.53□□□□□ -1.84
CSM3YMR048W GIR2Q03768 265 aaPredicted RBP3.53□□□□□ -1.84
CSM3YMR048W RBS1Q05672 457 aaKnown RBP3.53□□□□□ -1.84
CSM3YMR048W NKP2Q06162 153 aa3.53□□□□□ -1.84
CSM3YMR048W VTA1Q06263 330 aa3.53□□□□□ -1.84
CSM3YMR048W CFT2Q12102 859 aaPredicted RBP3.53□□□□□ -1.84
CSM3YMR048W LEU4P06208 619 aaKnown RBP3.52□□□□□ -1.85
CSM3YMR048W SPS4P09937 338 aa3.52□□□□□ -1.85
CSM3YMR048W GLK1P17709 500 aaKnown RBP3.52□□□□□ -1.85
CSM3YMR048W NPL6P32832 435 aa3.52□□□□□ -1.85
CSM3YMR048W REC114P32841 428 aa3.52□□□□□ -1.85
CSM3YMR048W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
CSM3YMR048W RFS1P38234 210 aaKnown RBP3.52□□□□□ -1.85
CSM3YMR048W NDT80P38830 627 aa3.52□□□□□ -1.85
CSM3YMR048W YFH7P43591 353 aa3.52□□□□□ -1.85
CSM3YMR048W GWT1P47026 490 aa3.52□□□□□ -1.85
CSM3YMR048W URB2P47108 1174 aa3.52□□□□□ -1.85
CSM3YMR048W EAF6P47128 113 aa3.52□□□□□ -1.85
CSM3YMR048W ERV2Q12284 196 aa3.52□□□□□ -1.85
CSM3YMR048W YOL159C-AQ3E769 90 aa3.52□□□□□ -1.85
CSM3YMR048W HHF1P02309 103 aaKnown RBP3.51□□□□□ -1.85
CSM3YMR048W RNR2P09938 399 aaKnown RBP3.51□□□□□ -1.85
CSM3YMR048W CLC1P17891 233 aa3.51□□□□□ -1.85
CSM3YMR048W YIM1P28625 365 aa3.51□□□□□ -1.85
CSM3YMR048W NFU1P32860 256 aa3.51□□□□□ -1.85
CSM3YMR048W MRP4P32902 394 aa3.51□□□□□ -1.85
CSM3YMR048W OPY1P38271 328 aa3.51□□□□□ -1.85
CSM3YMR048W SYG1P40528 902 aa3.51□□□□□ -1.85
CSM3YMR048W DLD2P46681 530 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms