RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W SEM1O94742 89 aa1.9□□□□□ -2.1
VPS34YLR240W MF(ALPHA)1P01149 165 aa1.9□□□□□ -2.1
VPS34YLR240W PUT4P15380 627 aa1.9□□□□□ -2.1
VPS34YLR240W KGD1P20967 1014 aaKnown RBP1.9□□□□□ -2.1
VPS34YLR240W YCK1P23291 538 aa1.9□□□□□ -2.1
VPS34YLR240W FMP46P36141 133 aaKnown RBP1.9□□□□□ -2.1
VPS34YLR240W YBL029WP38201 376 aa1.9□□□□□ -2.1
VPS34YLR240W REG2P38232 338 aa1.9□□□□□ -2.1
VPS34YLR240W POP4P38336 279 aa1.9□□□□□ -2.1
VPS34YLR240W LAG1P38703 411 aa1.9□□□□□ -2.1
VPS34YLR240W TMA108P40462 946 aa1.9□□□□□ -2.1
VPS34YLR240W DIM1P41819 318 aaKnown RBP1.9□□□□□ -2.1
VPS34YLR240W MIC19P43594 170 aa1.9□□□□□ -2.1
VPS34YLR240W CTK3P46963 296 aaPredicted RBP1.9□□□□□ -2.1
VPS34YLR240W RCF2P53721 224 aa1.9□□□□□ -2.1
VPS34YLR240W KTR5P53966 522 aaPredicted RBP1.9□□□□□ -2.1
VPS34YLR240W UTP6Q02354 440 aaKnown RBP1.9□□□□□ -2.1
VPS34YLR240W PPM1Q04081 328 aa1.9□□□□□ -2.1
VPS34YLR240W IVY1Q04934 453 aa1.9□□□□□ -2.1
VPS34YLR240W PHO2P07269 559 aa1.9□□□□□ -2.11
VPS34YLR240W SAM1P10659 382 aaKnown RBP1.9□□□□□ -2.11
VPS34YLR240W SGV1P23293 657 aaKnown RBP1.9□□□□□ -2.11
VPS34YLR240W RPS2P25443 254 aaKnown RBP1.9□□□□□ -2.11
VPS34YLR240W IMG1P25626 169 aa1.9□□□□□ -2.11
VPS34YLR240W YCR051WP25631 222 aa1.9□□□□□ -2.11
VPS34YLR240W DEP1P31385 405 aa1.9□□□□□ -2.11
VPS34YLR240W ACH1P32316 526 aa1.9□□□□□ -2.11
VPS34YLR240W SSE2P32590 693 aaKnown RBP1.9□□□□□ -2.11
VPS34YLR240W MTR2P34232 184 aaKnown RBP1.9□□□□□ -2.11
VPS34YLR240W APE3P37302 537 aaKnown RBP1.9□□□□□ -2.11
VPS34YLR240W ROT2P38138 954 aa1.9□□□□□ -2.11
VPS34YLR240W SHE3P38272 425 aaKnown RBP1.9□□□□□ -2.11
VPS34YLR240W RRT2P38332 387 aa1.9□□□□□ -2.11
VPS34YLR240W CCT6P39079 546 aa1.9□□□□□ -2.11
VPS34YLR240W LCP5P40079 357 aaPredicted RBP1.9□□□□□ -2.11
VPS34YLR240W TRS85P46944 698 aa1.9□□□□□ -2.11
VPS34YLR240W YJR054WP47114 497 aa1.9□□□□□ -2.11
VPS34YLR240W MND1P53102 219 aa1.9□□□□□ -2.11
VPS34YLR240W DUO1P53168 247 aaKnown RBP1.9□□□□□ -2.11
VPS34YLR240W PEX31P53203 462 aa1.9□□□□□ -2.11
VPS34YLR240W TDA7P53882 636 aaPredicted RBP1.9□□□□□ -2.11
VPS34YLR240W YNL146WP53906 100 aa1.9□□□□□ -2.11
VPS34YLR240W RHO4Q00246 291 aa1.9□□□□□ -2.11
VPS34YLR240W MSC1Q03104 513 aa1.9□□□□□ -2.11
VPS34YLR240W URH1Q04179 340 aa1.9□□□□□ -2.11
VPS34YLR240W RRB1Q04225 511 aaKnown RBP1.9□□□□□ -2.11
VPS34YLR240W BUD22Q04347 519 aaKnown RBP1.9□□□□□ -2.11
VPS34YLR240W YDR222WQ04925 415 aa1.9□□□□□ -2.11
VPS34YLR240W RTT103Q05543 409 aa1.9□□□□□ -2.11
VPS34YLR240W LUC7Q07508 261 aaPredicted RBP1.9□□□□□ -2.11
VPS34YLR240W FMP45Q07651 309 aa1.9□□□□□ -2.11
VPS34YLR240W SIL1Q08199 421 aa1.9□□□□□ -2.11
VPS34YLR240W YOL075CQ08234 1294 aa1.9□□□□□ -2.11
VPS34YLR240W YKL068W-AQ3E826 78 aa1.9□□□□□ -2.11
VPS34YLR240W YBR126W-AQ8TGU7 68 aa1.9□□□□□ -2.11
VPS34YLR240W JIP3O13555 125 aa1.89□□□□□ -2.11
VPS34YLR240W RAD1P06777 1100 aa1.89□□□□□ -2.11
VPS34YLR240W POX1P13711 748 aa1.89□□□□□ -2.11
VPS34YLR240W CDC42P19073 191 aa1.89□□□□□ -2.11
VPS34YLR240W BOS1P25385 244 aa1.89□□□□□ -2.11
VPS34YLR240W POL4P25615 582 aa1.89□□□□□ -2.11
VPS34YLR240W RIM1P32445 135 aaKnown RBP1.89□□□□□ -2.11
VPS34YLR240W MRE11P32829 692 aa1.89□□□□□ -2.11
VPS34YLR240W RAD5P32849 1169 aaPredicted RBP1.89□□□□□ -2.11
VPS34YLR240W PEX5P35056 612 aa1.89□□□□□ -2.11
VPS34YLR240W SWC5P38326 303 aa1.89□□□□□ -2.11
VPS34YLR240W RRP3P38712 501 aaKnown RBP1.89□□□□□ -2.11
VPS34YLR240W END3P39013 349 aa1.89□□□□□ -2.11
VPS34YLR240W ERP2P39704 215 aa1.89□□□□□ -2.11
VPS34YLR240W FLC2P39719 783 aa1.89□□□□□ -2.11
VPS34YLR240W NOP16P40007 231 aaKnown RBP1.89□□□□□ -2.11
VPS34YLR240W DSN1P40568 576 aa1.89□□□□□ -2.11
VPS34YLR240W AXL1P40851 1208 aa1.89□□□□□ -2.11
VPS34YLR240W CPR7P47103 393 aa1.89□□□□□ -2.11
VPS34YLR240W YJR079WP47126 109 aa1.89□□□□□ -2.11
VPS34YLR240W MRX6P48564 524 aa1.89□□□□□ -2.11
VPS34YLR240W BRO1P48582 844 aa1.89□□□□□ -2.11
VPS34YLR240W YGL260WP53056 76 aa1.89□□□□□ -2.11
VPS34YLR240W DRN1P53255 507 aaKnown RBP1.89□□□□□ -2.11
VPS34YLR240W CRZ1P53968 678 aa1.89□□□□□ -2.11
VPS34YLR240W ARK1P53974 638 aa1.89□□□□□ -2.11
VPS34YLR240W YPL014WQ02606 381 aa1.89□□□□□ -2.11
VPS34YLR240W PRM6Q04705 352 aa1.89□□□□□ -2.11
VPS34YLR240W GRX8Q05926 109 aa1.89□□□□□ -2.11
VPS34YLR240W YTH1Q06102 208 aaPredicted RBP1.89□□□□□ -2.11
VPS34YLR240W KAP95Q06142 861 aaKnown RBP1.89□□□□□ -2.11
VPS34YLR240W DIC1Q06143 298 aa1.89□□□□□ -2.11
VPS34YLR240W YDL121CQ07541 149 aa1.89□□□□□ -2.11
VPS34YLR240W YEH2Q07950 538 aa1.89□□□□□ -2.11
VPS34YLR240W THI20Q08224 551 aa1.89□□□□□ -2.11
VPS34YLR240W FMP40Q08968 688 aaPredicted RBP1.89□□□□□ -2.11
VPS34YLR240W SPE3Q12074 293 aaKnown RBP1.89□□□□□ -2.11
VPS34YLR240W DAP1Q12091 152 aa1.89□□□□□ -2.11
VPS34YLR240W NMD4Q12129 218 aa1.89□□□□□ -2.11
VPS34YLR240W NCA2Q12374 616 aa1.89□□□□□ -2.11
VPS34YLR240W ASP3-2P0CX77 362 aa1.89□□□□□ -2.11
VPS34YLR240W ASP3-3P0CX78 362 aa1.89□□□□□ -2.11
VPS34YLR240W ASP3-4P0CX79 362 aa1.89□□□□□ -2.11
VPS34YLR240W ASP3-1P0CZ17 362 aa1.89□□□□□ -2.11
VPS34YLR240W MRS3P10566 314 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 6.5 ms