RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C PCP1P53259 346 aa4.07□□□□□ -1.76
SED5YLR026C RPT6Q01939 405 aaKnown RBP4.07□□□□□ -1.76
SED5YLR026C TAP42Q04372 366 aa4.07□□□□□ -1.76
SED5YLR026C SOV1Q04748 898 aa4.07□□□□□ -1.76
SED5YLR026C MRD1Q06106 887 aaKnown RBP4.07□□□□□ -1.76
SED5YLR026C RBD2Q12270 262 aa4.07□□□□□ -1.76
SED5YLR026C PMT1P33775 817 aa4.06□□□□□ -1.76
SED5YLR026C SPO22P40511 975 aa4.06□□□□□ -1.76
SED5YLR026C NCA3P46955 337 aa4.06□□□□□ -1.76
SED5YLR026C YLR152CP54072 576 aa4.06□□□□□ -1.76
SED5YLR026C OCA4P25366 362 aa4.05□□□□□ -1.76
SED5YLR026C CDC60P26637 1090 aaKnown RBP4.05□□□□□ -1.76
SED5YLR026C AFG1P32317 509 aa4.05□□□□□ -1.76
SED5YLR026C TIM10P87108 93 aa4.05□□□□□ -1.76
SED5YLR026C MRP51Q02950 344 aa4.05□□□□□ -1.76
SED5YLR026C NUP192P47054 1683 aa4.05□□□□□ -1.76
SED5YLR026C CFT1Q06632 1357 aaKnown RBP4.04□□□□□ -1.76
SED5YLR026C SUP35P05453 685 aaKnown RBP4.04□□□□□ -1.76
SED5YLR026C IDH2P28241 369 aaKnown RBP4.04□□□□□ -1.76
SED5YLR026C STB6P36085 766 aa4.04□□□□□ -1.76
SED5YLR026C PRM5P40476 318 aa4.04□□□□□ -1.76
SED5YLR026C YGR149WP48236 432 aa4.04□□□□□ -1.76
SED5YLR026C YIP1P53039 248 aa4.04□□□□□ -1.76
SED5YLR026C MUM3Q08750 479 aa4.04□□□□□ -1.76
SED5YLR026C SPB1P25582 841 aaPredicted RBP4.03□□□□□ -1.76
SED5YLR026C RAD14P28519 371 aa4.03□□□□□ -1.76
SED5YLR026C SPR1P32603 445 aa4.03□□□□□ -1.76
SED5YLR026C RIB5P38145 238 aa4.03□□□□□ -1.76
SED5YLR026C LAM5P43560 674 aa4.03□□□□□ -1.76
SED5YLR026C YGL039WP53183 348 aaKnown RBP4.03□□□□□ -1.76
SED5YLR026C HRI1Q05905 244 aaKnown RBP4.03□□□□□ -1.76
SED5YLR026C ATG29Q12092 213 aa4.03□□□□□ -1.76
SED5YLR026C URB1P34241 1764 aaKnown RBP4.03□□□□□ -1.76
SED5YLR026C FKS3Q04952 1785 aa4.02□□□□□ -1.77
SED5YLR026C ARG3P05150 338 aa4.02□□□□□ -1.77
SED5YLR026C RHO2P06781 192 aa4.02□□□□□ -1.77
SED5YLR026C PET123P17558 318 aa4.02□□□□□ -1.77
SED5YLR026C RVS161P25343 265 aaKnown RBP4.02□□□□□ -1.77
SED5YLR026C CMC1P36064 111 aa4.02□□□□□ -1.77
SED5YLR026C NCS2P53923 493 aaPredicted RBP4.02□□□□□ -1.77
SED5YLR026C HXT11P54862 567 aa4.02□□□□□ -1.77
SED5YLR026C YPR022CQ12139 1133 aa4.02□□□□□ -1.77
SED5YLR026C TY4B-HP0C2J7 1802 aa4.02□□□□□ -1.77
SED5YLR026C TY4B-JP47024 1803 aa4.02□□□□□ -1.77
SED5YLR026C SOD1P00445 154 aaKnown RBP4.01□□□□□ -1.77
SED5YLR026C VID24P38263 362 aa4.01□□□□□ -1.77
SED5YLR026C MST28P39552 234 aa4.01□□□□□ -1.77
SED5YLR026C PAN6P40459 309 aa4.01□□□□□ -1.77
SED5YLR026C HXT14P42833 540 aa4.01□□□□□ -1.77
SED5YLR026C YDR387CQ04162 555 aa4.01□□□□□ -1.77
SED5YLR026C RAD61Q99359 647 aa4.01□□□□□ -1.77
SED5YLR026C TY3B-IQ7LHG5 1498 aaKnown RBP4□□□□□ -1.77
SED5YLR026C RPS8AP0CX39 200 aaKnown RBP4□□□□□ -1.77
SED5YLR026C RPS8BP0CX40 200 aaKnown RBP4□□□□□ -1.77
SED5YLR026C SPS22P25380 463 aa4□□□□□ -1.77
SED5YLR026C TIP1P27654 210 aaPredicted RBP4□□□□□ -1.77
SED5YLR026C ITR1P30605 584 aa4□□□□□ -1.77
SED5YLR026C GPI10P30777 616 aa4□□□□□ -1.77
SED5YLR026C SEC66P33754 206 aa4□□□□□ -1.77
SED5YLR026C TFG2P41896 400 aaPredicted RBP4□□□□□ -1.77
SED5YLR026C RMD9P53140 646 aaKnown RBP4□□□□□ -1.77
SED5YLR026C DSL1P53847 754 aa4□□□□□ -1.77
SED5YLR026C PKH2Q12236 1081 aaKnown RBP4□□□□□ -1.77
SED5YLR026C DAL2P25335 343 aa3.99□□□□□ -1.77
SED5YLR026C CCT2P39076 527 aaKnown RBP3.99□□□□□ -1.77
SED5YLR026C MET18P40469 1032 aa3.99□□□□□ -1.77
SED5YLR026C VMA13P41807 478 aaKnown RBP3.99□□□□□ -1.77
SED5YLR026C RIM20Q12033 661 aa3.99□□□□□ -1.77
SED5YLR026C IMP2'P32351 346 aa3.98□□□□□ -1.77
SED5YLR026C ECM25P32525 599 aa3.98□□□□□ -1.77
SED5YLR026C NIP100P33420 868 aa3.98□□□□□ -1.77
SED5YLR026C MSG5P38590 489 aa3.98□□□□□ -1.77
SED5YLR026C YIF1P53845 314 aaKnown RBP3.98□□□□□ -1.77
SED5YLR026C PPM1Q04081 328 aa3.98□□□□□ -1.77
SED5YLR026C TIM18Q08749 192 aa3.98□□□□□ -1.77
SED5YLR026C YLR278CQ05854 1341 aa3.97□□□□□ -1.77
SED5YLR026C APE2P32454 952 aaKnown RBP3.97□□□□□ -1.77
SED5YLR026C PRP21P32524 280 aaPredicted RBP3.97□□□□□ -1.77
SED5YLR026C REC114P32841 428 aa3.97□□□□□ -1.77
SED5YLR026C MNS1P32906 549 aa3.97□□□□□ -1.77
SED5YLR026C YBR137WP38276 179 aa3.97□□□□□ -1.77
SED5YLR026C SSN8P47821 323 aa3.97□□□□□ -1.77
SED5YLR026C HER2Q03557 464 aa3.97□□□□□ -1.77
SED5YLR026C HSP31Q04432 237 aa3.97□□□□□ -1.77
SED5YLR026C SLY1P22213 666 aa3.96□□□□□ -1.78
SED5YLR026C PPH22P23595 377 aa3.96□□□□□ -1.78
SED5YLR026C GYP6P32806 458 aa3.96□□□□□ -1.78
SED5YLR026C JJJ1P53863 590 aa3.96□□□□□ -1.78
SED5YLR026C TOM1Q03280 3268 aa3.96□□□□□ -1.78
SED5YLR026C TRP1P00912 224 aa3.95□□□□□ -1.78
SED5YLR026C SPS4P09937 338 aa3.95□□□□□ -1.78
SED5YLR026C RPI1P23250 407 aaKnown RBP3.95□□□□□ -1.78
SED5YLR026C SHY1P53266 389 aa3.95□□□□□ -1.78
SED5YLR026C MTM1P53320 366 aa3.95□□□□□ -1.78
SED5YLR026C FRE4P53746 719 aa3.95□□□□□ -1.78
SED5YLR026C NFT1P0CE68 1218 aa3.94□□□□□ -1.78
SED5YLR026C UTH1P36135 365 aa3.94□□□□□ -1.78
SED5YLR026C ECM27P47144 725 aa3.94□□□□□ -1.78
SED5YLR026C CWC25P53854 179 aaKnown RBP3.94□□□□□ -1.78
SED5YLR026C PEX25Q02969 394 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms