RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C NSG1P38837 291 aa3.04□□□□□ -1.92
RPN1YHR027C IPL1P38991 367 aa3.04□□□□□ -1.92
RPN1YHR027C FMP52P40008 231 aa3.04□□□□□ -1.92
RPN1YHR027C RPN3P40016 523 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C VRG4P40107 337 aa3.04□□□□□ -1.92
RPN1YHR027C PKP1P40530 394 aa3.04□□□□□ -1.92
RPN1YHR027C HXT14P42833 540 aa3.04□□□□□ -1.92
RPN1YHR027C FAR3P46671 204 aa3.04□□□□□ -1.92
RPN1YHR027C YJR056CP47115 236 aa3.04□□□□□ -1.92
RPN1YHR027C ECM27P47144 725 aa3.04□□□□□ -1.92
RPN1YHR027C SNN1P48232 102 aa3.04□□□□□ -1.92
RPN1YHR027C YGL138CP53122 345 aa3.04□□□□□ -1.92
RPN1YHR027C GPI1P53306 609 aa3.04□□□□□ -1.92
RPN1YHR027C MRPL22P53881 309 aa3.04□□□□□ -1.92
RPN1YHR027C CBK1P53894 756 aa3.04□□□□□ -1.92
RPN1YHR027C HXT11P54862 567 aa3.04□□□□□ -1.92
RPN1YHR027C YAT1P80235 687 aa3.04□□□□□ -1.92
RPN1YHR027C PRM15Q03262 622 aa3.04□□□□□ -1.92
RPN1YHR027C CSN9Q03981 162 aa3.04□□□□□ -1.92
RPN1YHR027C SND1Q04007 877 aa3.04□□□□□ -1.92
RPN1YHR027C YET3Q07451 203 aa3.04□□□□□ -1.92
RPN1YHR027C BDS1Q08347 646 aa3.04□□□□□ -1.92
RPN1YHR027C AAD15Q08361 143 aa3.04□□□□□ -1.92
RPN1YHR027C LPX1Q12405 387 aaKnown RBP3.04□□□□□ -1.92
RPN1YHR027C LDB19Q12502 818 aa3.04□□□□□ -1.92
RPN1YHR027C YOR019WQ99248 730 aa3.04□□□□□ -1.92
RPN1YHR027C MYO1P08964 1928 aa3.03□□□□□ -1.92
RPN1YHR027C BCY1P07278 416 aaKnown RBP3.03□□□□□ -1.92
RPN1YHR027C CAF20P12962 161 aaKnown RBP3.03□□□□□ -1.92
RPN1YHR027C IFM1P25038 676 aa3.03□□□□□ -1.92
RPN1YHR027C YDJ1P25491 409 aaKnown RBP3.03□□□□□ -1.92
RPN1YHR027C MCM10P32354 571 aa3.03□□□□□ -1.92
RPN1YHR027C MDL2P33311 773 aa3.03□□□□□ -1.92
RPN1YHR027C BET3P36149 193 aa3.03□□□□□ -1.92
RPN1YHR027C LAG1P38703 411 aa3.03□□□□□ -1.92
RPN1YHR027C HSE1P38753 452 aa3.03□□□□□ -1.92
RPN1YHR027C SNG1P46950 547 aa3.03□□□□□ -1.92
RPN1YHR027C NBP1P52919 319 aaPredicted RBP3.03□□□□□ -1.92
RPN1YHR027C UFD1P53044 361 aa3.03□□□□□ -1.92
RPN1YHR027C YNR065CP53751 1116 aa3.03□□□□□ -1.92
RPN1YHR027C TIM44Q01852 431 aa3.03□□□□□ -1.92
RPN1YHR027C RMT2Q03305 412 aa3.03□□□□□ -1.92
RPN1YHR027C DCR2Q05924 578 aa3.03□□□□□ -1.92
RPN1YHR027C VID22Q05934 901 aa3.03□□□□□ -1.92
RPN1YHR027C GAS2Q06135 555 aa3.03□□□□□ -1.92
RPN1YHR027C YLR173WQ06247 608 aa3.03□□□□□ -1.92
RPN1YHR027C RAD34Q06665 692 aa3.03□□□□□ -1.92
RPN1YHR027C GRE2Q12068 342 aaKnown RBP3.03□□□□□ -1.92
RPN1YHR027C YGK3Q12222 375 aaPredicted RBP3.03□□□□□ -1.92
RPN1YHR027C YGL194C-AQ2V2P6 80 aa3.03□□□□□ -1.92
RPN1YHR027C AFI1Q99222 893 aa3.03□□□□□ -1.92
RPN1YHR027C HCM1P25364 564 aa3.03□□□□□ -1.92
RPN1YHR027C MGT1P26188 188 aa3.03□□□□□ -1.92
RPN1YHR027C UBC8P28263 218 aa3.03□□□□□ -1.92
RPN1YHR027C DEG1P31115 442 aaKnown RBP3.03□□□□□ -1.92
RPN1YHR027C ARO7P32178 256 aa3.03□□□□□ -1.92
RPN1YHR027C BIO2P32451 375 aa3.03□□□□□ -1.92
RPN1YHR027C MEI5P32489 222 aa3.03□□□□□ -1.92
RPN1YHR027C YNK1P36010 153 aaKnown RBP3.03□□□□□ -1.92
RPN1YHR027C PET10P36139 283 aa3.03□□□□□ -1.92
RPN1YHR027C MRPL15P36523 253 aa3.03□□□□□ -1.92
RPN1YHR027C NCL1P38205 684 aaKnown RBP3.03□□□□□ -1.92
RPN1YHR027C TCM62P38228 572 aaKnown RBP3.03□□□□□ -1.92
RPN1YHR027C IKI1P38874 309 aa3.03□□□□□ -1.92
RPN1YHR027C YJL206CP39529 758 aa3.03□□□□□ -1.92
RPN1YHR027C YEL025CP39991 1188 aa3.03□□□□□ -1.92
RPN1YHR027C SCC4P40090 624 aa3.03□□□□□ -1.92
RPN1YHR027C CFD1P40558 293 aa3.03□□□□□ -1.92
RPN1YHR027C YGR201CP42936 225 aa3.03□□□□□ -1.92
RPN1YHR027C ARC1P46672 376 aaKnown RBP3.03□□□□□ -1.92
RPN1YHR027C PAC10P48363 199 aa3.03□□□□□ -1.92
RPN1YHR027C VOA1P53262 265 aa3.03□□□□□ -1.92
RPN1YHR027C HCH1P53834 153 aa3.03□□□□□ -1.92
RPN1YHR027C YNL033WP53964 284 aa3.03□□□□□ -1.92
RPN1YHR027C YNL019CP53975 284 aa3.03□□□□□ -1.92
RPN1YHR027C ECM9Q02202 377 aa3.03□□□□□ -1.92
RPN1YHR027C UBP16Q02863 499 aa3.03□□□□□ -1.92
RPN1YHR027C YPL113CQ02961 396 aa3.03□□□□□ -1.92
RPN1YHR027C SSL1Q04673 461 aaPredicted RBP3.03□□□□□ -1.92
RPN1YHR027C YHC1Q05900 231 aaKnown RBP3.03□□□□□ -1.92
RPN1YHR027C UTP21Q06078 939 aaPredicted RBP3.03□□□□□ -1.92
RPN1YHR027C ASR1Q06834 288 aa3.03□□□□□ -1.92
RPN1YHR027C TPO1Q07824 586 aa3.03□□□□□ -1.92
RPN1YHR027C PEX27Q08580 376 aa3.03□□□□□ -1.92
RPN1YHR027C SCP1Q08873 200 aa3.03□□□□□ -1.92
RPN1YHR027C TCO89Q08921 799 aa3.03□□□□□ -1.92
RPN1YHR027C PKH2Q12236 1081 aaKnown RBP3.03□□□□□ -1.92
RPN1YHR027C SFM1Q12314 213 aa3.03□□□□□ -1.92
RPN1YHR027C HIS5P07172 385 aa3.03□□□□□ -1.93
RPN1YHR027C ARG80P07249 177 aa3.03□□□□□ -1.93
RPN1YHR027C CIT2P08679 460 aa3.03□□□□□ -1.93
RPN1YHR027C SSA3P09435 649 aaKnown RBP3.03□□□□□ -1.93
RPN1YHR027C GAP1P19145 602 aaPredicted RBP3.03□□□□□ -1.93
RPN1YHR027C PHO80P20052 293 aa3.03□□□□□ -1.93
RPN1YHR027C BUB3P26449 341 aa3.03□□□□□ -1.93
RPN1YHR027C URA7P28274 579 aaKnown RBP3.03□□□□□ -1.93
RPN1YHR027C AEP1P32493 518 aa3.03□□□□□ -1.93
RPN1YHR027C SOF1P33750 489 aaKnown RBP3.03□□□□□ -1.93
RPN1YHR027C PCS60P38137 543 aaKnown RBP RIP-Chip data3.03□□□□□ -1.93not detected
RPN1YHR027C FLC2P39719 783 aa3.03□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms